List of oligonucleotides according to the level of sequence conservation

The table describes different measures of sequence conservation for each oligonucleotide:
-PIS: percentage of identical sites
-3'PIS: percentage of identical sites in the last five nucleotides at the 3' end of oligonucleotide
-PPI: percentage of pairwise identity
-CoV2ID score: mean value of PIS, 3'PIS and PPI
The mean values were obtained considering Alig01 and Alig02 alignments in the database.

Databasereference	Target	Originalname	Sequence(5-3)	Positioninreferencegenome	Genomicregion	MeanPIS	Mean3PIS	MeanPPI	CoV2ID score
Databasereference	Target	Originalname	Sequence(5-3)	Positioninreferencegenome	Genomicregion	MeanPIS	Mean3PIS	MeanPPI	CoV2ID score
CoV2ID001 Raw data Min-max	PCR primer forward	China_CDC_Meta1_F	CCCTGTGGGTTTTACACTTAA	13342-13362	ORF1ab	100	100	100	100
CoV2ID002 Raw data Min-max	PCR primer reverse	China_CDC_Meta1_R	ACGATTGTGCATCAGCTGA	13442-13460	ORF1ab	94.73	90	99.9	94.88
CoV2ID003 Raw data Min-max	Probe	China_CDC_Meta1_P	CCGTCTGCGGTATGTGGAAAGGTTATGG	13377-13404	ORF1ab	92.86	90	99.88	94.25
CoV2ID004 Raw data Min-max	PCR primer forward	China_CDC_Meta2_F	GGGGAACTTCTCCTGCTAGAAT	28881-28902	N	72.72	90	98.25	86.99
CoV2ID005 Raw data Min-max	PCR primer reverse	China_CDC_Meta2_R	CAGACATTTTGCTCTCAAGCTG	28958-28979	N	90.91	100	99.98	96.96
CoV2ID006 Raw data Min-max	Probe	China_CDC_Meta2_P	TTGCTGCTGCTTGACAGATT	28934-28953	N	100	100	100	100
CoV2ID007 Raw data Min-max	PCR primer forward	Charite_RdRP_SARSr-F2	GTGARATGGTCATGTGTGGCGG	15431-15452	ORF1ab	95.45	90	100	95.15
CoV2ID008 Raw data Min-max	PCR primer reverse	Charite_RdRP_SARSr-R1	CARATGTTAAASACACTATTAGCATA	15505-15530	ORF1ab	100	100	100	100
CoV2ID009 Raw data Min-max	Probe	Charite_RdRP_SARSr-P2	CAGGTGGAACCTCATCAGGAGATGC	15470-15494	ORF1ab	96	100	100	98.67
CoV2ID010 Raw data Min-max	Probe	Charite_RdRP_SARSr-P1	CCAGGTGGWACRTCATCMGGTGATGC	15469-15494	ORF1ab	96.16	100	100	98.72
CoV2ID011 Raw data Min-max	PCR primer forward	Charite_E_Sarbeco_F1	ACAGGTACGTTAATAGTTAATAGCGT	26269-26294	E	96.16	100	100	98.72
CoV2ID012 Raw data Min-max	PCR primer reverse	Charite_E_Sarbeco_R2	ATATTGCAGCAGTACGCACACA	26360-26381	E	97.72	100	100	99.24
CoV2ID013 Raw data Min-max	Probe	Charite_E_Sarbeco_P1	ACACTAGCCATCCTTACTGCGCTTCG	26332-26357	E	90.39	70	99.96	86.78
CoV2ID014 Raw data Min-max	PCR primer forward	HKU-ORF1b-nsp14F	TGGGGYTTTACRGGTAACCT	18778-18797	ORF1ab	45	40	99.03	61.34
CoV2ID015 Raw data Min-max	PCR primer reverse	HKU- ORF1b-nsp14R	AACRCGCTTAACAAAGCACTC	18889-18909	ORF1b-nsp15	40.48	50	99.05	63.17
CoV2ID016 Raw data Min-max	Probe	HKU-ORF1b-nsp141P	TAGTTGTGATGCWATCATGACTAG	18849-18872	ORF1b-nsp16	47.91	50	99.06	65.66
CoV2ID017 Raw data Min-max	PCR primer forward	HKU-NF	TAATCAGACAAGGAACTGATTA	29145-29166	N	97.72	100	99.97	99.23
CoV2ID018 Raw data Min-max	PCR primer reverse	HKU-NR	CGAAGGTGTGACTTCCATG	29236-29254	N	86.84	80	99.97	88.94
CoV2ID019 Raw data Min-max	Probe	HKU-NP	GCAAATTGTGCAATTTGCGG	29177-29196	N	95	100	100	98.33
CoV2ID020 Raw data Min-max	PCR primer forward	WH-NIC N-F	CGTTTGGTGGACCCTCAGAT	28320-28339	N	92.5	100	100	97.5
CoV2ID021 Raw data Min-max	PCR primer reverse	WH-NIC N-R	CCCCACTGCGTTCTCCATT	28358-28376	N	86.84	100	99.94	95.59
CoV2ID022 Raw data Min-max	Probe	WH-NIC N-P	CAACTGGCAGTAACCA	28341-28356	N	96.88	100	99.98	98.95
CoV2ID023 Raw data Min-max	PCR primer forward	NIID_WH-1_F501	TTCGGATGCTCGAACTGCACC	484-504	ORF1ab	45.24	50	98.91	64.72
CoV2ID024 Raw data Min-max	PCR primer reverse	NIID_WH-1_R913	CTTTACCAGCACGTGCTAGAAGG	874-896	ORF1ab	93.48	80	99.97	91.15
CoV2ID025 Raw data Min-max	PCR primer forward	NIID_WH-1_F509	CTCGAACTGCACCTCATGG	492-510	ORF1ab	47.37	40	98.77	62.04
CoV2ID026 Raw data Min-max	PCR primer reverse	NIID_WH-1_R854	CAGAAGTTGTTATCGACATAGC	816-837	ORF1ab	93.18	100	99.97	97.71
CoV2ID027 Raw data Min-max	PCR primer forward	NIID_WH-1_Seq_F519	ACCTCATGGTCATGTTATGG	502-521	ORF1ab	30	10	97.6	45.87
CoV2ID028 Raw data Min-max	PCR primer reverse	NIID_WH-1_Seq_R840	GACATAGCGAGTGTATGCC	805-823	ORF1ab	97.37	100	100	99.12
CoV2ID029 Raw data Min-max	PCR primer forward	WuhanCoV-spk1-f	TTGGCAAAATTCAAGACTCACTTT	24354-24377	S	36	40	99.03	58.34
CoV2ID030 Raw data Min-max	PCR primer reverse	WuhanCoV-spk2-r	TGTGGTTCATAAAAATTCCTTTGTG	24876-24900	S	48	50	99.06	65.69
CoV2ID031 Raw data Min-max	PCR primer forward	NIID_WH-1_F24381	TCAAGACTCACTTTCTTCCAC	24364-24384	S	26.19	10	98.97	45.05
CoV2ID032 Raw data Min-max	PCR primer reverse	NIID_WH-1_R24873	ATTTGAAACAAAGACACCTTCAC	24834-24856	S	45.65	40	99.05	61.57
CoV2ID033 Raw data Min-max	PCR primer forward	NIID_WH-1_Seq_F24383	AAGACTCACTTTCTTCCACAG	24366-24386	S	28.57	30	98.97	52.51
CoV2ID034 Raw data Min-max	PCR primer reverse	NIID_WH-1_Seq_R24865	CAAAGACACCTTCACGAGG	24830-24848	S	44.73	40	99.05	61.26
CoV2ID035 Raw data Min-max	PCR primer forward	NIID_2019-nCOV_N_F2	AAATTTTGGGGACCAGGAAC	29125-29144	N	95	80	99.98	91.66
CoV2ID036 Raw data Min-max	PCR primer reverse	NIID_2019-nCOV_N_R2	TGGCAGCTGTGTAGGTCAAC	29263-29282	N	87.5	90	99.99	92.5
CoV2ID037 Raw data Min-max	Probe	NIID_2019-nCOV_N_P2	ATGTCGCGCATTGGCATGGA	29222-29241	N	82.5	80	99.94	87.48
CoV2ID038 Raw data Min-max	PCR primer forward	CDC_2019-nCoV_N1-F	GACCCCAAAATCAGCGAAAT	28287-28306	N	83.34	90	99.98	91.11
CoV2ID039 Raw data Min-max	PCR primer reverse	CDC_2019-nCoV_N1-R	TCTGGTTACTGCCAGTTGAATCTG	28335-28358	N	95.84	100	99.99	98.61
CoV2ID040 Raw data Min-max	Probe	CDC_2019-nCoV_N1-P	ACCCCGCATTACGTTTGGTGGACC	28309-28332	N	89.59	80	99.95	89.85
CoV2ID041 Raw data Min-max	PCR primer forward	CDC_2019-nCoV_N2-F	TTACAAACATTGGCCGCAAA	29164-29183	N	95	90	100	95
CoV2ID042 Raw data Min-max	PCR primer reverse	CDC_2019-nCoV_N2-R	GCGCGACATTCCGAAGAA	29213-29230	N	88.88	100	99.94	96.28
CoV2ID043 Raw data Min-max	Probe	CDC_2019-nCoV_N2-P	ACAATTTGCCCCCAGCGCTTCAG	29188-29210	N	93.48	100	100	97.83
CoV2ID044 Raw data Min-max	PCR primer forward	CDC_2019-nCoV_N3-F	GGGAGCCTTGAATACACCAAAA	28681-28702	N	93.18	100	99.91	97.7
CoV2ID045 Raw data Min-max	PCR primer reverse	CDC_2019-nCoV_N3-R	TGTAGCACGATTGCAGCATTG	28732-28752	N	92.85	100	99.99	97.62
CoV2ID046 Raw data Min-max	Probe	CDC_2019-nCoV_N3-P	AYCACATTGGCACCCGCAATCCTG	28704-28727	N	88.63	80	99.99	89.54
CoV2ID047 Raw data Min-max	PCR primer forward	Pasteur_nCoV_IP2-12669Fw	ATGAGCTTAGTCCTGTTG	12690-12707	ORF1ab	100	100	100	100
CoV2ID048 Raw data Min-max	PCR primer reverse	Pasteur_nCoV_IP2-12759Rv	CTCCCTTTGTTGTGTTGT	12780-12797	ORF1ab	91.66	90	99.97	93.88
CoV2ID049 Raw data Min-max	Probe	Pasteur_nCoV_IP2-12696bProbe	AGATGTCTTGTGCTGCCGGTA	12717-12737	ORF1ab	97.62	100	100	99.21
CoV2ID050 Raw data Min-max	PCR primer forward	Pasteur_nCoV_IP4-14059Fw	GGTAACTGGTATGATTTCG	14080-14098	ORF1ab	100	100	100	100
CoV2ID051 Raw data Min-max	PCR primer reverse	Pasteur_nCoV_IP4-14146Rv	CTGGTCAAGGTTAATATAGG	14167-14186	ORF1ab	97.5	100	100	99.17
CoV2ID052 Raw data Min-max	Probe	Pasteur_nCoV_IP4-14084Probe	TCATACAAACCACGCCAGG	14105-14123	ORF1ab	92.1	80	100	90.7
CoV2ID053 Raw data Min-max	PCR primer forward	RBD-qF1	CAATGGTTTAACAGGCACAGG	23191 - 23211	S	47.5	50	99.06	65.52
CoV2ID054 Raw data Min-max	PCR primer reverse	RBD-qR1	CTCAAGTGTCTGTGGATCACG	23291 - 23311	S	100	100	100	100
CoV2ID055 Raw data Min-max	PCR primer forward	ND-CoVs-951F	TGTKAGRTTYCCTAAYATTAC	22540 - 22560	S	50	50	98.67	66.22
CoV2ID056 Raw data Min-max	PCR primer reverse	D-CoVs-1805R	ACATCYTGATANARAACAGC	23387 - 23406	S	90	100	98.71	96.24
CoV2ID057 Raw data Min-max	PCR primer forward	nCoV_2019 Forward	CAAATTCTATGGTGGTTGGCACA	15216 - 15238	ORF1ab	47.83	40	99.06	62.29
CoV2ID058 Raw data Min-max	PCR primer reverse	nCoV_2019 Reverse	GGCATGGCTCTATCACATTTAGG	15298 - 15320	ORF1ab	50	50	99.06	66.35
CoV2ID059 Raw data Min-max	Probe	CoV_Probe	ATAATCCCAACCCATRAG	15280 - 15297	ORF1ab	50	50	99.06	66.35
CoV2ID060 Raw data Min-max	Target Generation	N-gene-FWD IVT	AATTCTAATACGACTCACTATAGGGCCAAA(...)	28519 - 28545	N	96.3	100	100	98.76
CoV2ID061 Raw data Min-max	Target Generation	N-gene-REV IVT	CACAGTTTGCTGTTTCTTCTGTCTCTGCGG	29420 - 29449	N	40.33	30	98.12	56.15
CoV2ID062 Raw data Min-max	Target Generation	E-gene-FWD IVT	AATTCTAATACGACTCACTATAGGGCTGGT(...)	26060 - 26088	E	94.83	90	99.98	94.94
CoV2ID063 Raw data Min-max	Target Generation	E-gene-REV IVT	CCTATTACTAGGTTCCATTGTTC	26574 - 26596	E	97.83	100	100	99.27
CoV2ID064 Raw data Min-max	LAMP outer forward primer	F3 2019-nCoV N-gene	AACACAAGCTTTCGGCAG	29083 - 29100	N	94.44	100	99.76	98.07
CoV2ID065 Raw data Min-max	LAMP outer backward primer	B3 2019-nCoV N-gene	GAAATTTGGATCTTTGTCATCC	29290 - 29311	N	84.09	90	99.85	91.31
CoV2ID066 Raw data Min-max	LAMP backward inner primer	BIP 2019-nCoV N-gene	TGCGGCCAATGTTTGTAATCAGCCAAGGAA(...)	29119 - 29137	N	95.45	100	100	98.48
CoV2ID067 Raw data Min-max	LAMP forward inner primer	FIP 2019-nCoV N-gene	CGCATTGGCATGGAAGTCACTTTGATGGCA(...)	29269 - 29287	N	82.5	90	99.94	90.81
CoV2ID068 Raw data Min-max	LAMP loop forward primer	LF 2019-nCoV N-gene	TTCCTTGTCTGATTAGTTC	29141 - 29159	N	94.73	100	99.95	98.23
CoV2ID069 Raw data Min-max	LAMP loop backward primer	LB 2019-nCoV N-gene	ACCTTCGGGAACGTGGTT	29248 - 29265	N	91.66	100	99.98	97.21
CoV2ID070 Raw data Min-max	LAMP outer forward primer	F3 2019-nCoV E-gene	CCGACGACGACTACTAGC	26191 - 26208	E	77.78	100	99.78	92.52
CoV2ID071 Raw data Min-max	LAMP outer backward primer	B3 2019-nCoV E-gene	AGAGTAAACGTAAAAAGAAGGTT	26402 - 26424	E	95.65	100	100	98.55
CoV2ID072 Raw data Min-max	LAMP backward inner primer	BIP 2019-nCoV E-gene	ACCTGTCTCTTCCGAAACGAATTTGTAAGC(...)	26214 - 26233	E	88.63	90	100	92.88
CoV2ID073 Raw data Min-max	LAMP forward inner primer	FIP 2019-nCoV E-gene	CTAGCCATCCTTACTGCGCTACTCACGTTA(...)	26374 - 26394	E	100	100	100	100
CoV2ID074 Raw data Min-max	LAMP loop forward primer	LF 2019-nCoV E-gene	TCGATTGTGTGCGTACTGC	26355 - 26373	E	97.37	90	100	95.79
CoV2ID075 Raw data Min-max	LAMP loop backward primer	LB 2019-nCoV E-gene	TGAGTACATAAGTTCGTAC	26235 - 26253	E	100	100	100	100
CoV2ID076 Raw data Min-max	PCR primer forward	N_Sarbeco_F	CACATTGGCACCCGCAATC	28706 - 28724	N	92.1	100	99.99	97.37
CoV2ID077 Raw data Min-max	PCR primer reverse	N_Sarbeco_R	GAGGAACGAGAAGAGGCTTG	28814 - 28833	N	87.5	90	99.97	92.49
CoV2ID078 Raw data Min-max	Probe	N_Sarbeco_P	ACTTCCTCAAGGAACAACATTGCCA	28753 - 28777	N	98	100	100	99.33
CoV2ID079 Raw data Min-max	PCR primer forward	nsp2f	ATGCATTTGCATCAGAGGCT	1866 - 1885	ORF1ab	97.5	90	100	95.83
CoV2ID080 Raw data Min-max	PCR primer reverse	nsp2r	TTGTTATAGCGGCCTTCTGT	1951 - 1970	ORF1ab	91.66	100	99.84	97.17
CoV2ID081 Raw data Min-max	PCR primer forward	N_gene_Taq1	TCTGGTAAAGGCCAACAACAA	28976 - 28996	N	95.24	100	99.98	98.41
CoV2ID082 Raw data Min-max	PCR primer reverse	N_gene_Taq2	TGTATGCTTTAGTGGCAGTACG	29057 - 29078	N	97.72	100	100	99.24
CoV2ID083 Raw data Min-max	Probe	N_gene_Probe	CTGTCACTAAGAAATCTGCTGCTGAGGC	29007 - 29034	N	89.28	100	99.99	96.42
CoV2ID084 Raw data Min-max	PCR primer forward	orf1ab-F	CAGACCTCGTCTATGCTTTAAGGC	13814 - 13837	ORF1ab	97.91	90	100	95.97
CoV2ID085 Raw data Min-max	PCR primer reverse	orf1ab-R	CCCTGGTCAAGGTTAATATAGGCA	14165 - 14188	ORF1ab	97.91	100	100	99.3
CoV2ID086 Raw data Min-max	PCR primer forward	S-F	CTTCCCTCAGTCAGCACCTC	24715 - 24734	S	100	100	100	100
CoV2ID087 Raw data Min-max	PCR primer reverse	S-R	AACCAGTGTGTGCCATTTGA	24815 - 24870	S	45	50	98.98	64.66
CoV2ID088 Raw data Min-max	LAMP outer forward primer	orf1ab-4F3	GGTATGATTTTGTAGAAAACCCA	13925 - 13947	ORF1ab	93.75	90	99.97	94.57
CoV2ID089 Raw data Min-max	LAMP outer backward primer	orf1ab-4B3	CAACAGGAACTCCACTACC	14122 - 14140	ORF1ab	97.37	90	100	95.79
CoV2ID090 Raw data Min-max	LAMP forward inner primer	orf1ab-4FIP	GGCATCACAGAATTGTACTGTTTTTGCGTA(...)	13958 - 13976	ORF1ab	98	100	100	99.33
CoV2ID091 Raw data Min-max	LAMP backward inner primer	orf1ab-4BIP	AATGCTGGTATTGTTGGTGTACTGAGGTTT(...)	14095 - 14115	ORF1ab	96	90	99.96	95.32
CoV2ID092 Raw data Min-max	LAMP loop forward primer	orf1ab-4LF	AACAAAGCTTGGCGTACACGTTCA	13977 - 14000	ORF1ab	97.91	90	100	95.97
CoV2ID093 Raw data Min-max	LAMP outer forward primer	S-123F3	TCTATTGCCATACCCACAA	23693 - 23711	S	47.37	40	99.05	62.14
CoV2ID094 Raw data Min-max	LAMP outer backward primer	S-123B3	GGTGTTTTGTAAATTTGTTTGAC	23915 - 23937	S	43.48	50	99.01	64.16
CoV2ID095 Raw data Min-max	LAMP forward inner primer	S-123FIP	CATTCAGTTGAATCACCACAAATGTGTGTT(...)	23724 - 23745	S	50	50	98.13	66.04
CoV2ID096 Raw data Min-max	LAMP backward inner primer	S-123BIP	GTTGCAATATGGCAGTTTTTGTACATTGGG(...)	23880 - 23899	S	50	50	99.06	66.35
CoV2ID097 Raw data Min-max	LAMP loop forward primer	S-123LF	ACTGATGTCTTGGTCATAGACACT	23746 - 23769	S	45.84	50	98.12	64.65
CoV2ID098 Raw data Min-max	LAMP loop backward primer	S-123LB	TAAACCGTGCTTTAACTGGAATAGC	23850 - 23874	S	44	40	99.05	61.02
CoV2ID099 Raw data Min-max	PCR primer forward	Chan_S_gene_F	CCTACTAAATTAAATGATCTCTGCTTTACT	22712 - 22741	S	48.34	50	99.06	65.8
CoV2ID100 Raw data Min-max	PCR primer reverse	Chan_S_gene_R	CAAGCTATAACGCAGCCTGTA	22849 - 22869	S	38.09	50	99.05	62.38
CoV2ID101 Raw data Min-max	PCR primer forward	Chan_RdRp_gene_F	CAAGTGGGGTAAGGCTAGACTTT	14965 - 14983	ORF1ab	50	50	99.06	66.35
CoV2ID102 Raw data Min-max	PCR primer reverse	Chan_RdRp_gene_R	ACTTAGGATAATCCCAACCCAT	15283 - 15302	ORF1ab	50	50	99.06	66.35
CoV2ID103 Raw data Min-max	PCR primer forward	Caly_BetaCoV_RdRp_F	AAATTCTATGGTGGTTGGCACAACATGTT	15217 - 15245	ORF1ab	46.55	50	99.06	65.2
CoV2ID104 Raw data Min-max	PCR primer reverse	Caly_BetaCoV_RdRp_R	TAGGCATAGCTCTRTCACAYTT	15301 - 15322	ORF1ab	50	50	99.06	66.35
CoV2ID105 Raw data Min-max	Probe	Caly_BetaCoV_RdRp_P	TGGGTTGGGATTATC	15284 - 15298	ORF1ab	50	50	99.06	66.35
CoV2ID106 Raw data Min-max	PCR primer forward	Huang_E_gene_F	ACTTCTTTTTCTTGCTTTCGTGGT	26295 - 26318	E	95.84	100	100	98.61
CoV2ID107 Raw data Min-max	PCR primer reverse	Huang_E_gene_R	GCAGCAGTACGCACACAATC	26357 - 26376	E	97.5	100	100	99.17
CoV2ID108 Raw data Min-max	Probe	Huang_E_gene_P	CTAGTTACACTAGCCATCCTTACTGC	26326 - 26351	E	92.31	90	99.92	94.08
CoV2ID109 Raw data Min-max	PCR primer forward	Lu_orf1ab_F	AGAAGATTGGTTAGATGATGATAGT	3193 - 3217	ORF1ab	50	50	99.06	66.35
CoV2ID110 Raw data Min-max	PCR primer reverse	Lu_orf1ab_R	TTCCATCTCTAATTGAGGTTGAACC	3286 - 3310	ORF1ab	96	90	100	95.33
CoV2ID111 Raw data Min-max	Probe	Lu_orf1ab_P	TCCTCACTGCCGTCTTGTTGACCA	3229 - 3252	ORF1ab	54.16	70	99.13	74.43
CoV2ID112 Raw data Min-max	LAMP outer forward primer	F3 2019-nCoV N1-gene	TGGACCCCAAAATCAGCG	28285 - 28302	N	84.21	90	99.99	91.4
CoV2ID113 Raw data Min-max	LAMP outer backward primer	B3 2019-nCoV N1-gene	GCCTTGTCCTCGAGGGAAT	28468 - 28486	N	94.73	90	100	94.91
CoV2ID114 Raw data Min-max	LAMP forward inner primer	FIP 2019-nCoV N1-gene	CCACTGCGTTCTCCATTCTGGTAAATGCAC(...)	28303 - 28321	N	88.63	80	99.95	89.53
CoV2ID115 Raw data Min-max	LAMP backward inner primer	BIP 2019-nCoV N1-gene	CGCGATCAAAACAACGTCGGCCCTTGCCAT(...)	28438 - 28457	N	91.31	70	99.91	87.07
CoV2ID116 Raw data Min-max	LAMP loop forward primer	LF 2019-nCoV N1-gene	TGAATCTGAGGGTCCACCAAA	28322 - 28342	N	90.47	90	100	93.49
CoV2ID117 Raw data Min-max	LAMP loop backward primer	LB 2019-nCoV N1-gene	GGTTTACCCAATAATACTGCGTCTT	28403 - 28427	N	96	100	99.96	98.65
CoV2ID118 Raw data Min-max	LAMP outer forward primer	F3 2019-nCoV N15-gene	AGATCACATTGGCACCCG	28702 - 28719	N	91.66	90	99.99	93.88
CoV2ID119 Raw data Min-max	LAMP outer backward primer	B3 2019-nCoV N15-gene	CCATTGCCAGCCATTCTAGC	28895 - 28914	N	75	80	99.98	84.99
CoV2ID120 Raw data Min-max	LAMP forward inner primer	FIP 2019-nCoV N15-gene	TGCTCCCTTCTGCGTAGAAGCCAATGCTGC(...)	28732 - 28751	N	90.91	90	99.94	93.62
CoV2ID121 Raw data Min-max	LAMP backward inner primer	BIP 2019-nCoV N15-gene	GGCGGCAGTCAAGCCTCTTCCCTACTGCTG(...)	28864 - 28883	N	90	90	99.98	93.33
CoV2ID122 Raw data Min-max	LAMP loop forward primer	LF 2019-nCoV N15-gene	GCAATGTTGTTCCTTGAGGAAGTT	28752 - 28775	N	97.91	100	100	99.3
CoV2ID123 Raw data Min-max	LAMP loop backward primer	LB 2019-nCoV N15-gene	GTTCCTCATCACGTAGTCGCAACA	28827 - 28850	N	77.09	80	99.94	85.68
CoV2ID124 Raw data Min-max	LAMP outer forward primer	F3 2019-nCoV S17-gene	TCTTTCACACGTGGTGTT	21653 - 21670	S	47.22	50	99.06	65.42
CoV2ID125 Raw data Min-max	LAMP outer backward primer	B3 2019-nCoV S17-gene	GTACCAAAAATCCAGCCTC	21867 - 21885	S	47.37	50	99.06	65.48
CoV2ID126 Raw data Min-max	LAMP forward inner primer	FIP 2019-nCoV S17-gene	CATGGAACCAAGTAACATTGGAAAACCTGA(...)	21677 - 21697	S	46	50	99.05	65.02
CoV2ID127 Raw data Min-max	LAMP backward inner primer	BIP 2019-nCoV S17-gene	CTCTGGGACCAATGGTACTAAGAGGACTTC(...)	21838 - 21855	S	38	30	99.05	55.68
CoV2ID128 Raw data Min-max	LAMP loop forward primer	LF 2019-nCoV S17-gene	GAAAGGTAAGAACAAGTCCTGAGT	21713 - 21736	S	45.84	50	99.05	64.96
CoV2ID129 Raw data Min-max	LAMP loop backward primer	LB 2019-nCoV S17-gene	CTGTCCTACCATTTAATGATGGTGT	21807 - 21831	S	42	40	99.05	60.35
CoV2ID130 Raw data Min-max	LAMP outer forward primer	F3 2019-nCoV O117-gene	CCCCAAAATGCTGTTGTT	1346 - 1363	ORF1ab	94.44	100	100	98.15
CoV2ID131 Raw data Min-max	LAMP outer backward primer	B3 2019-nCoV O117-gene	TAGCACGTGGAACCCAAT	1530 - 1547	ORF1ab	50	50	99.06	66.35
CoV2ID132 Raw data Min-max	LAMP forward inner primer	FIP 2019-nCoV O117-gene	GGTTTTCAAGCCAGATTCATTATGGATGTC(...)	1381 - 1402	ORF1ab	38	50	99.02	62.34
CoV2ID133 Raw data Min-max	LAMP backward inner primer	BIP 2019-nCoV O117-gene	TCTTCGTAAGGGTGGTCGCAGCACACTTGT(...)	1509 - 1527	ORF1ab	42.5	40	99.05	60.52
CoV2ID134 Raw data Min-max	LAMP loop forward primer	LF 2019-nCoV O117-gene	TCGGCAAGACTATGCTCAGG	1403 - 1422	ORF1ab	45	50	99.05	64.68
CoV2ID135 Raw data Min-max	LAMP loop backward primer	LB 2019-nCoV O117-gene	TTGCCTTTGGAGGCTGTGT	1476 - 1494	ORF1ab	44.73	50	99.05	64.59
CoV2ID136 Raw data Min-max	LAMP outer forward primer	F3 2019-nCoV orf1ab-gene	AAACGTAATGTCATCCCTACT	15034 - 15054	ORF1ab	50	50	99.06	66.35
CoV2ID137 Raw data Min-max	LAMP outer backward primer	B3 2019-nCoV orf1ab-gene	ACTGTTTATAGTGATGTAGAAAACC	15250 - 15274	ORF1ab	46.16	50	99.06	65.07
CoV2ID138 Raw data Min-max	LAMP forward inner primer	FIP 2019-nCoV orf1ab-gene	ACAGATAGAGACACCAGCTACGGCTCAAAT(...)	15059 - 15082	ORF1ab	50	50	99.06	66.35
CoV2ID139 Raw data Min-max	LAMP backward inner primer	BIP 2019-nCoV orf1ab-gene	ATAGCCGCCACTAAGAGGAGCCCAACCACC(...)	15215 - 15234	ORF1ab	50	50	99.06	66.35
CoV2ID140 Raw data Min-max	LAMP loop backward primer	LF 2019-nCoV orf1ab-gene	TTAGTGCAAAGAATAGAGCTCGCA	15083 - 15106	N	50	50	99.06	66.35
CoV2ID141 Raw data Min-max	LAMP outer forward primer	F3 2019-nCoV N-gene	GCCAAAAGGCTTCTACGCA	28774 - 28792	N	92.1	80	99.94	90.68
CoV2ID142 Raw data Min-max	LAMP outer backward primer	B3 2019-nCoV N-gene	TTGCTCTCAAGCTGGTTCAA	28952 - 28971	N	95	100	100	98.33
CoV2ID143 Raw data Min-max	LAMP forward inner primer	FIP 2019-nCoV N-gene	TCCCCTACTGCTGCCTGGAGCAGTCAAGCC(...)	28809 - 28829	N	88.09	80	99.98	89.36
CoV2ID144 Raw data Min-max	LAMP backward inner primer	BIP 2019-nCoV N-gene	TCTCCTGCTAGAATGGCTGGCATCTGTCAA(...)	28932 - 28952	N	79.55	100	99.98	93.17
CoV2ID145 Raw data Min-max	LAMP loop backward primer	LB 2019-nCoV N-gene	TGGCGGTGATGCTGCTCTT	28912 - 28930	N	84.21	70	99.94	84.72
CoV2ID146 Raw data Min-max	LAMP outer forward primer	GeneN-A-F3	TGGCTACTACCGAAGAGCT	28525 - 28543	N	97.37	90	99.99	95.79
CoV2ID147 Raw data Min-max	LAMP outer backward primer	GeneN-A-B3	TGCAGCATTGTTAGCAGGAT	28722 - 28741	N	90	90	99.99	93.33
CoV2ID148 Raw data Min-max	LAMP loop forward primer	GeneN-A-LF	GGACTGAGATCTTTCATTTTACCGT	28566 - 28590	N	98	100	100	99.33
CoV2ID149 Raw data Min-max	LAMP loop backward primer	GeneN-A-LB	ACTGAGGGAGCCTTGAATACA	28676 - 28696	N	88.09	80	99.9	89.33
CoV2ID150 Raw data Min-max	LAMP forward inner primer	GeneN-A-FIP	TCTGGCCCAGTTCCTAGGTAGTCCAGACGA(...)	28545 - 28563	N	95.45	100	100	98.48
CoV2ID151 Raw data Min-max	LAMP backward inner primer	GeneN-A-BIP	AGACGGCATCATATGGGTTGCACGGGTGCC(...)	28702 - 28719	N	89.39	80	99.91	89.76
CoV2ID152 Raw data Min-max	LAMP loop forward primer	2019-nCoV N-gene_LF	CGACTACGTGATGAGGAACGA	28825 - 28845	N	78.57	60	99.94	79.5
CoV2ID153 Raw data Min-max	LAMP loop backward primer	2019-nCoV N-gene_LB	AATGGCGGTGATGCTGCTCTT	28910 - 28930	N	85.72	90	99.94	91.88
CoV2ID154 Raw data Min-max	LAMP outer forward primer	F3 2019-nCoV orf-gene	TGCTTCAGTCAGCTGATG	13434 - 13451	ORF1ab	97.22	100	99.95	99.06
CoV2ID155 Raw data Min-max	LAMP outer backward primer	B3 2019-nCoV orf-gene	TTAAATTGTCATCTTCGTCCTT	13615 - 13636	ORF1ab	95.45	90	100	95.15
CoV2ID156 Raw data Min-max	LAMP forward inner primer	FIP 2019-nCoV orf-gene	TCAGTACTAGTGCCTGTGCCCACAATCGTT(...)	13452 - 13472	ORF1ab	95.24	100	99.91	98.38
CoV2ID157 Raw data Min-max	LAMP backward inner primer	BIP 2019-nCoV orf-gene	TCGTATACAGGGCTTTTGACATCTATCTTG(...)	13596 - 13613	ORF1ab	92	100	99.91	97.3
CoV2ID158 Raw data Min-max	LAMP loop forward primer	LF 2019-nCoV orf-gene	CTGCACTTACACCGCAA	13473 - 13489	ORF1ab	100	100	100	100
CoV2ID159 Raw data Min-max	LAMP loop backward primer	LB 2019-nCoV orf-gene	GTAGCTGGTTTTGCTAAATTCC	13564 - 13585	ORF1ab	90.91	90	99.89	93.6
CoV2ID160 Raw data Min-max	LAMP outer forward primer	As1_ORF1ab_F3	GGTGGACAAATTGTCAC	2246 - 2262	ORF1ab	100	100	100	100
CoV2ID161 Raw data Min-max	LAMP outer backward primer	As1_ORF1ab_B3	CTTCTCTGGATTTAACACACTT	2420 - 2441	ORF1ab	100	100	100	100
CoV2ID162 Raw data Min-max	LAMP loop forward primer	As1_ORF1ab_LF	TTACAAGCTTAAAGAATGTCTGAACACT	2285 - 2312	ORF1ab	96.43	100	100	98.81
CoV2ID163 Raw data Min-max	LAMP loop backward primer	As1_ORF1ab_LB	TTGAATTTAGGTGAAACATTTGTCACG	2372 - 2398	ORF1ab	96.3	100	100	98.76
CoV2ID164 Raw data Min-max	LAMP forward inner primer	As1_ORF1ab_FIP	TCAGCACACAAAGCCAAAAATTTATCTGTG(...)	2263 - 2284	ORF1ab	96	90	100	95.33
CoV2ID165 Raw data Min-max	LAMP backward inner primer	As1_ORF1ab_BIP	TATTGGTGGAGCTAAACTTAAAGCCCTGTA(...)	2399 - 2418	ORF1ab	100	100	100	100
CoV2ID166 Raw data Min-max	LAMP forward inner primer	As1e_ORF1ab_FIP	TCAGCACACAAAGCCAAAAATTTATTTTTC(...)	2263 - 2284	ORF1ab	96.3	90	100	95.43
CoV2ID167 Raw data Min-max	LAMP backward inner primer	As1e_ORF1ab_BIP	TATTGGTGGAGCTAAACTTAAAGCCTTTTC(...)	2399 - 2421	ORF1ab	100	100	100	100
CoV2ID168 Raw data Min-max	RPA forward primer	Metsky_orf1ab_F	gaaatTAATACGACTCACTATAgggCCAAG(...)	3130 - 3159	ORF1ab	43.34	50	98.06	63.8
CoV2ID169 Raw data Min-max	RPA reverse primer	Metsky_orf1ab_R	ACTATCATCATCTAACCAATCTTCTTCTTG	3188 - 3217	ORF1ab	50	50	99.06	66.35
CoV2ID170 Raw data Min-max	RPA forward primer	orf1ab_F	TAATACGACTCACTATAGGGACATAAACAA(...)	12041 - 12073	ORF1ab	46.97	70	99.16	72.05
CoV2ID171 Raw data Min-max	RPA reverse primer	orf1ab_R	TTGAGCAGTAGCAAAAGCTGCATATGATGG(...)	12115 - 12148	ORF1ab	89.7	70	99.97	86.56
CoV2ID172 Raw data Min-max	gRNA	gRNA_ORF1ab	GGGGAUUUAGACUACCCCAAAAACGAAGGG(...)	12082 - 12109	ORF1ab	94.65	100	100	98.21
CoV2ID173 Raw data Min-max	LAMP outer forward primer	nCoV-N-F3	CCAGAATGGAGAACGCAGTG	28354 - 28373	N	90	90	99.95	93.32
CoV2ID174 Raw data Min-max	LAMP outer backward primer	nCoV-N-B3	CCGTCACCACCACGAATT	28552 - 28569	N	100	100	100	100
CoV2ID175 Raw data Min-max	LAMP forward inner primer	nCoV-N-FIP	AGCGGTGAACCAAGACGCAGGGCGCGATCA(...)	28374 - 28392	N	97.5	100	100	99.17
CoV2ID176 Raw data Min-max	LAMP backward inner primer	nCoV-N-BIP	AATTCCCTCGAGGACAAGGCGAGCTCTTCG(...)	28524 - 28543	N	95.24	100	100	98.41
CoV2ID177 Raw data Min-max	LAMP loop forward primer	nCoV-N-LF	TTATTGGGTAAACCTTGGGGC	28396 - 28416	N	92.86	100	99.95	97.6
CoV2ID178 Raw data Min-max	LAMP loop backward primer	nCoV-N-LB	TTCCAATTAACACCAATAGCAGTCC	28488 - 28512	N	100	100	100	100
CoV2ID179 Raw data Min-max	LAMP outer backward primer	Baek_nCoV N-B3	AGCCAATTTGGTCATCTGGA	28510 - 28529	N	97.5	100	100	99.17
CoV2ID180 Raw data Min-max	LAMP forward inner primer	Baek_nCoV N-FIP	CGTTGTTTTGATCGCGCCCCATTACGTTTG(...)	28315 - 28335	N	92.85	90	100	94.28
CoV2ID181 Raw data Min-max	LAMP backward inner primer	Baek_nCoV N-BIP	ATACTGCGTCTTGGTTCACCGCATTGGAAC(...)	28476 - 28494	N	97.72	100	100	99.24
CoV2ID182 Raw data Min-max	LAMP loop forward primer	Baek_nCoV N-LF	TGCGTTCTCCATTCTGGTTACT	28349 - 28370	N	93.18	70	99.95	87.71
CoV2ID183 Raw data Min-max	LAMP loop backward primer	Baek_nCoV N-LB	TCTCACTCAACATGGCAAGGAA	28438 - 28459	N	97.72	100	100	99.24
CoV2ID184 Raw data Min-max	LAMP outer forward primer	Nsp3_1-61_F3	GGAATTTGGTGCCACTTC	3145 - 3162	ORF1ab	47.22	50	98.02	65.08
CoV2ID185 Raw data Min-max	LAMP outer backward primer	Nsp3_1-61_B3	CTATTCACTTCAATAGTCTGAACA	3322 - 3345	ORF1ab	95.84	100	100	98.61
CoV2ID186 Raw data Min-max	LAMP forward inner primer	Nsp3_1-61_FIP	CTTGTTGACCAACAGTTTGTTGACTTCAAC(...)	3170 - 3190	ORF1ab	50	50	99.06	66.35
CoV2ID187 Raw data Min-max	LAMP backward inner primer	Nsp3_1-61_BIP	CGGCAGTGAGGACAATCAGACACTGGTGTA(...)	3302 - 3321	ORF1ab	70.45	50	99.53	73.33
CoV2ID188 Raw data Min-max	LAMP loop forward primer	Nsp3_1-61_LF	ATCATCATCTAACCAATCTTCTTC	3191 - 3214	ORF1ab	50	50	99.06	66.35
CoV2ID189 Raw data Min-max	LAMP loop backward primer	Nsp3_1-61_LB	TCAAACAATTGTTGAGGTTCAACC	3271 - 3294	ORF1ab	95.84	100	100	98.61
CoV2ID190 Raw data Min-max	LAMP outer forward primer	Nsp3_2-24_F3	TGCAACTAATAAAGCCACG	6253 - 6271	ORF1ab	94.73	100	99.98	98.24
CoV2ID191 Raw data Min-max	LAMP outer backward primer	Nsp3_2-24_B3	CGTCTTTCTGTATGGTAGGATT	6425 - 6446	ORF1ab	88.63	90	100	92.88
CoV2ID192 Raw data Min-max	LAMP forward inner primer	Nsp3_2-24_FIP	TCTGACTTCAGTACATCAAACGAATAAATA(...)	6280 - 6302	ORF1ab	92	100	100	97.33
CoV2ID193 Raw data Min-max	LAMP backward inner primer	Nsp3_2-24_BIP	GACGCGCAGGGAATGGATAATTCCACTACT(...)	6403 - 6424	ORF1ab	100	100	100	100
CoV2ID194 Raw data Min-max	LAMP loop forward primer	Nsp3_2-24_LF	TGTTTCAACTGGTTTTGTGCTCCA	6305 - 6328	ORF1ab	93.75	90	99.95	94.57
CoV2ID195 Raw data Min-max	LAMP loop backward primer	Nsp3_2-24_LB	TCTTGCCTGCGAAGATCTAAAAC	6379 - 6401	ORF1ab	95.65	100	100	98.55
CoV2ID196 Raw data Min-max	LAMP outer forward primer	S_1-2-2_F3	CTGACAAAGTTTTCAGATCCTCAG	21678 - 21701	S	43.75	40	98.12	60.62
CoV2ID197 Raw data Min-max	LAMP outer backward primer	S_1-2-2_B3	AGTACCAAAAATCCAGCCTCTT	21865 - 21886	S	47.73	50	99.06	65.59
CoV2ID198 Raw data Min-max	LAMP forward inner primer	S_1-2-2_FIP	TCCCAGAGACATGTATAGCATGGAATCAAC(...)	21710 - 21732	S	42	30	99.05	57.02
CoV2ID199 Raw data Min-max	LAMP backward inner primer	S_1-2-2_BIP	TGGTACTAAGAGGTTTGATAACCCTGTTAG(...)	21838 - 21860	S	44.45	40	99.05	61.16
CoV2ID200 Raw data Min-max	LAMP loop forward primer	S_1-2-2_LF	CCAAGTAACATTGGAAAAGAAA	21733 - 21754	S	45.45	50	99.05	64.83
CoV2ID201 Raw data Min-max	LAMP loop backward primer	S_1-2-2_LB	GTCCTACCATTTAATGATGGTGTTT	21809 - 21833	S	42	40	99.05	60.35
CoV2ID202 Raw data Min-max	LAMP forward inner primer	N_21_FIP	TCCCCTACTGCTGCCTGGAGGCAGTCAAGC(...)	28808 - 28827	N	85	80	99.97	88.32
CoV2ID203 Raw data Min-max	LAMP loop forward primer	N_21_LF	TGTTGCGACTACGTGATGAGGA	28829 - 28850	N	77.28	70	99.94	82.41
CoV2ID204 Raw data Min-max	LAMP loop backward primer	N_21_LB	ATGGCGGTGATGCTGCTCT	28911 - 28929	N	86.84	80	99.94	88.93
CoV2ID205 Raw data Min-max	LAMP outer forward primer	NB-F3	ACCGAAGAGCTACCAGACG	28533 - 28551	N	97.37	100	99.99	99.12
CoV2ID206 Raw data Min-max	LAMP forward inner primer	NB-FIP	TCTGGCCCAGTTCCTAGGTAGTTCGTGGTG(...)	28554 - 28572	N	95.45	100	100	98.48
CoV2ID207 Raw data Min-max	LAMP loop forward primer	NB-LF	CCATCTTGGACTGAGATCTTTCATT	28573 - 28597	N	98	100	100	99.33
CoV2ID208 Raw data Min-max	LAMP outer forward primer	Lamb-F3	TCCAGATGAGGATGAAGAAGA	3043 - 3063	ORF1ab	45.24	50	98.12	64.45
CoV2ID209 Raw data Min-max	LAMP outer backward primer	Lamb-B3	AGTCTGAACAACTGGTGTAAG	3311 - 3331	ORF1ab	95.24	90	100	95.08
CoV2ID210 Raw data Min-max	LAMP forward inner primer	Lamb-FIP	AGAGCAGCAGAAGTGGCACAGGTGATTGTG(...)	3064 - 3085	ORF1ab	47.73	40	98.13	61.95
CoV2ID211 Raw data Min-max	LAMP backward inner primer	Lamb-BIP	TCAACCTGAAGAAGAGCAAGAACTGATTGT(...)	3242 - 3259	ORF1ab	43.18	40	98.91	60.7
CoV2ID212 Raw data Min-max	LAMP loop forward primer	Lamb-LF	CTCATATTGAGTTGATGGCTCA	3088 - 3109	ORF1ab	45.45	50	98.04	64.5
CoV2ID213 Raw data Min-max	LAMP loop backward primer	Lamb-LB	ACAAACTGTTGGTCAACAAGAC	3220 - 3241	ORF1ab	50	50	99.06	66.35
CoV2ID214 Raw data Min-max	PCR primer forward	PCR-C-fwd primer	ACACTCTTTCCCTACACGACGCTCTTCCGA(...)	29192 - 29214	N	95.65	100	100	98.55
CoV2ID215 Raw data Min-max	PCR primer reverse	PCR-C-rev primer	TGACTGGAGTTCAGACGTGTGCTCTTCCGA(...)	29149 - 29172	N	97.91	100	100	99.3
CoV2ID216 Raw data Min-max	LAMP outer backward primer	Wang_N_B3	TTTGGCCTTGTTGTTGTTGG	28987 - 29006	N	95	100	99.99	98.33
CoV2ID217 Raw data Min-max	LAMP forward inner primer	Wang_N_FIP	TCCCCTACTGCTGCCTGGAGTTTTCGGCAG(...)	28807 - 28824	N	81.81	70	98.17	83.33
CoV2ID218 Raw data Min-max	LAMP backward inner primer	Wang_N_BIP	TCCTGCTAGAATGGCTGGCAATTTTTTTTG(...)	28953 - 28973	N	79.55	90	99.98	89.84
CoV2ID219 Raw data Min-max	LAMP loop backward primer	Wang_N_LB	GCGGTGATGCTGCTCT	28914 - 28929	N	87.5	80	99.92	89.14
CoV2ID220 Raw data Min-max	RPA forward primer	E-Sarbeco_F1_RPA	GAAGAGACAGGTACGTTAATAGTTAATAGC(...)	26263 - 26294	E	95.31	100	100	98.44
CoV2ID221 Raw data Min-max	RPA reverse primer	E-Sarbeco-R2_RPA	ACGTTAACAATATTGCAGCAGTACGCACAC(...)	26360 - 26390	E	98.38	100	100	99.46
CoV2ID222 Raw data Min-max	RPA forward primer	2019-nCoV_N2-F_RPA	ACAAGGAACTGATTACAAACATTGGCCGCA(...)	29152 - 29183	N	96.88	90	100	95.62
CoV2ID223 Raw data Min-max	RPA reverse primer	2019-nCoV_N2-R_RPA	TTCCATGCCAATGCGCGACATTCCGAAGAA	29213 - 29242	N	88.34	100	99.96	96.1
CoV2ID224 Raw data Min-max	PCR primer forward	Lamb_orf1ab_F	ATTTGGTGCCACTTCTGCTGC	3148 - 3168	ORF1ab	45.24	40	98.22	61.15
CoV2ID225 Raw data Min-max	PCR primer reverse	Lamb_orf1ab_R	TCACTGCCGTCTTGTTGACCA	3229 - 3249	ORF1ab	50	50	99.06	66.35
CoV2ID226 Raw data Min-max	LAMP outer forward primer	Yang_ORF1ab_F3	GTTACGATGGTGGCTGTA	14885 - 14902	ORF1ab	47.22	50	99.06	65.42
CoV2ID227 Raw data Min-max	LAMP outer backward primer	Yang_ORF1ab_B3	CTCAAATGAATCTTAAGTATGCC	15059 - 15081	ORF1ab	50	50	99.06	66.35
CoV2ID228 Raw data Min-max	LAMP forward inner primer	Yang_ORF1ab_FIP	GCTAACCAAGTCATCGTCAATCCATTTAAT(...)	14952 - 14976	ORF1ab	50	50	99.06	66.35
CoV2ID229 Raw data Min-max	LAMP backward inner primer	Yang_ORF1ab_BIP	AATGAGTTATGAGGATCAAGATGCAACGTA(...)	15035 - 15058	ORF1ab	48	50	99.06	65.69
CoV2ID230 Raw data Min-max	LAMP loop forward primer	Yang_ORF1ab_LF	ACCTAGACAAATCAGCTGGT	14930 - 14949	ORF1ab	47.5	50	99.06	65.52
CoV2ID231 Raw data Min-max	LAMP loop backward primer	Yang_ORF1ab_LB	CTTTTCGCATATACAAA	15019 - 15035	ORF1ab	44.12	50	99.05	64.39
CoV2ID232 Raw data Min-max	LAMP outer forward primer	Yang_E_F3	AGCTGATGAGTACGAACTT	26226 - 26244	E	94.73	100	99.99	98.24
CoV2ID233 Raw data Min-max	LAMP outer backward primer	Yang_E_B3	ACTCTCGTGTTAAAAATCTGAA	26420 - 26441	E	95.45	100	100	98.48
CoV2ID234 Raw data Min-max	LAMP forward inner primer	Yang_E_FIP	TTCGTTTCGGAAGAGACAGTACTTCTTTTT(...)	26293 - 26318	E	96.16	100	100	98.72
CoV2ID235 Raw data Min-max	LAMP backward inner primer	Yang_E_BIP	TTGCTAGTTACACTAGCCATCCTTACGTGA(...)	26387 - 26406	E	94.23	80	99.92	91.38
CoV2ID236 Raw data Min-max	LAMP loop forward primer	Yang_E_LF	GTACGTTAATAGTTAATAGCG	26273 - 26293	E	97.62	100	100	99.21
CoV2ID237 Raw data Min-max	LAMP loop backward primer	Yang_E_LB	GCGCTTCGATTGTGTGC	26350 - 26366	E	88.23	60	99.94	82.73
CoV2ID238 Raw data Min-max	LAMP forward inner primer	Yang_N_FIP	CAATGCTGCAATCGTGCTACGCTTCTACGC(...)	28782 - 28802	N	90.47	90	99.94	93.47
CoV2ID239 Raw data Min-max	LAMP backward inner primer	Yang_N_BIP	GGCGGCAGTCAAGCCTCTTCAACTCCAGGC(...)	28861 - 28882	N	77.28	70	98.57	81.95
CoV2ID240 Raw data Min-max	LAMP loop forward primer	Yang_N_LF	CTTCCTCAAGGAACAAC	28754 - 28770	N	97.06	100	100	99.02
CoV2ID241 Raw data Min-max	LAMP loop backward primer	Yang_N_LB	ACGTAGTCGCAACAGTTCAAGAAATT	28837 - 28862	N	75	90	99.78	88.26
CoV2ID242 Raw data Min-max	LAMP outer forward primer	Orf1a-A-F3	CTGCACCTCATGGTCATGTT	498 - 517	ORF1ab	37.5	10	97.97	48.49
CoV2ID243 Raw data Min-max	LAMP outer backward primer	Orf1a-A-B3	AGCTCGTCGCCTAAGTCAA	693 - 711	ORF1ab	84.21	50	99.89	78.03
CoV2ID244 Raw data Min-max	LAMP forward inner primer	Orf1a-A-FIP	GAGGGACAAGGACACCAAGTGTATGGTTGA(...)	517 - 537	ORF1ab	79.55	100	99.69	93.08
CoV2ID245 Raw data Min-max	LAMP backward inner primer	Orf1a-A-BIP	CCAGTGGCTTACCGCAAGGTTTTAGATCGG(...)	669 - 687	ORF1ab	83.34	100	99.88	94.41
CoV2ID246 Raw data Min-max	LAMP loop forward primer	Orf1a-A-LF	CCGTACTGAATGCCTTCGAGT	538 - 558	ORF1ab	42.85	40	99.05	60.63
CoV2ID247 Raw data Min-max	LAMP loop backward primer	Orf1a-A-LB	TTCGTAAGAACGGTAATAAAGGAGC	633 - 657	ORF1ab	96	90	99.96	95.32
CoV2ID248 Raw data Min-max	LAMP outer forward primer	Orf1a-B-F3	TCATCAAACGTTCGGATGCT	474 - 493	ORF1ab	45	40	98.91	61.3
CoV2ID249 Raw data Min-max	LAMP outer backward primer	Orf1a-B-B3	TATGGCCACCAGCTCCTT	651 - 668	ORF1ab	94.44	90	99.94	94.8
CoV2ID250 Raw data Min-max	LAMP forward inner primer	Orf1a-B-FIP	CGACCGTACTGAATGCCTTCGAGAACTGCA(...)	495 - 514	ORF1ab	43.48	40	99.05	60.84
CoV2ID251 Raw data Min-max	LAMP backward inner primer	Orf1a-B-BIP	AGACACTTGGTGTCCTTGTCCCAGAAGAAC(...)	614 - 633	ORF1ab	75	50	99.61	74.87
CoV2ID252 Raw data Min-max	LAMP loop forward primer	Orf1a-B-LF	CTGCTACCAGCTCAACCATAAC	515 - 536	ORF1ab	31.82	30	98.38	53.4
CoV2ID253 Raw data Min-max	LAMP loop backward primer	Orf1a-B-LB	TCATGTGGGCGAAATACCAGT	592 - 612	ORF1ab	97.62	100	100	99.21
CoV2ID254 Raw data Min-max	LAMP outer backward primer	Orf1a-C-B3	GATCAGTGCCAAGCTCGTC	704 - 722	ORF1ab	94.73	100	100	98.24
CoV2ID255 Raw data Min-max	LAMP forward inner primer	Orf1a-C-FIP	GAGGGACAAGGACACCAAGTGTGGTAGCAG(...)	528 - 547	ORF1ab	79.55	100	99.69	93.08
CoV2ID256 Raw data Min-max	LAMP loop forward primer	Orf1a-C-LF	ACCACTACGACCGTACTGAAT	548 - 568	ORF1ab	47.62	50	99.06	65.56
CoV2ID257 Raw data Min-max	LAMP outer forward primer	Zhu_Orf1ab_F3	GGATTTTGTGACTTAAAAGGTAAG	13286 - 13309	ORF1ab	95.84	80	100	91.94
CoV2ID258 Raw data Min-max	LAMP outer backward primer	Zhu_Orf1ab_B3	GGTTTGCGGTGTAAGTGCAGCCCGT	13470 - 13494	ORF1ab	98	100	99.96	99.32
CoV2ID259 Raw data Min-max	LAMP forward inner primer	Zhu_Orf1ab_FIP	TGTACAAATACCTACAACTTGTGACACTTA(...)	13355 - 13379	ORF1ab	98	100	100	99.33
CoV2ID260 Raw data Min-max	LAMP backward inner primer	Zhu_Orf1ab_BIP	TCTGCGGTATGTGGAAAGGTTATGCTGATG(...)	13445 - 13462	ORF1ab	91.67	90	99.86	93.84
CoV2ID261 Raw data Min-max	LAMP loop forward primer	Zhu_Orf1ab_LF	CTAATGACCCTGTGGGTTT	13335 - 13353	ORF1ab	97.37	100	100	99.12
CoV2ID262 Raw data Min-max	LAMP loop backward primer	Zhu_Orf1ab_LB	GAACCCATGCTTCAGTC	13427 - 13443	ORF1ab	94.12	80	99.94	91.36
CoV2ID263 Raw data Min-max	LAMP outer forward primer	Zhu_N_F3	CTACCTAGGAACTGGGCC	28606 - 28623	N	94.44	90	100	94.81
CoV2ID264 Raw data Min-max	LAMP outer backward primer	Zhu_N_B3	GGCAGTCAAGCCTCTTCT	28808 - 28825	N	88.89	80	99.98	89.62
CoV2ID265 Raw data Min-max	LAMP forward inner primer	Zhu_N_FIP	CCTATGGTGCTAACAAAGACTGAGGGAGCC(...)	28676 - 28698	N	89.13	100	99.91	96.34
CoV2ID266 Raw data Min-max	LAMP backward inner primer	Zhu_N_BIP	AATCCTGCTAACAATGCTGCAATCCTACGC(...)	28786 - 28803	N	89.59	90	99.99	93.19
CoV2ID267 Raw data Min-max	LAMP loop forward primer	Zhu_N_LF	GCATCATATGGGTTGCAAC	28659 - 28677	N	100	100	100	100
CoV2ID268 Raw data Min-max	LAMP loop backward primer	Zhu_N_LB	CTTCCTCAAGGAACAACAT	28754 - 28772	N	97.37	100	100	99.12
CoV2ID269 Raw data Min-max	PCR primer forward	Amrane_S_F	AAACTTGTGCCCTTTTGGTG	22561 - 22580	S	45.24	50	99.05	64.76
CoV2ID270 Raw data Min-max	PCR primer reverse	Amrane_S_R	TGCTGATTCTCTTCCTGTTCC	22620 - 22640	S	47.62	40	99.05	62.22
CoV2ID271 Raw data Min-max	Probe	Amrane_S_P	CGCCACCAGATTTGCATCTG	22591 - 22610	S	42.5	40	99.05	60.52
CoV2ID272 Raw data Min-max	PCR primer forward	Wu_For	ATGGGTTGGGATTATCCTAAATGTGA	15283 - 15308	ORF1ab	50	50	99.06	66.35
CoV2ID273 Raw data Min-max	PCR primer reverse	Wu_Rev	AGCAGTTGTGGCATCTCCTGATGAG	15480 - 15504	ORF1ab	96	90	100	95.33
CoV2ID274 Raw data Min-max	Probe	MGB Probe	ATGCTTAGAATTATGGCCTCAC	15325 - 15346	ORF1ab	56.82	90	99.27	82.03
CoV2ID275 Raw data Min-max	PCR primer forward	short_N_spk_2_F	AAGACGGCATCATATGGGTTGC	28653 - 28674	N	91.47	100	99.8	97.09
CoV2ID276 Raw data Min-max	PCR primer reverse	short_N_spk_1_R	GGCAATGTTGTTCCTTGAGGAAG	28754 - 28776	N	97.83	100	100	99.27
CoV2ID277 Raw data Min-max	LAMP outer forward primer	Yu_orf1ab_F3	CCACTAGAGGAGCTACTGTA	15182 - 15201	ORF1ab	50	50	99.01	66.34
CoV2ID278 Raw data Min-max	LAMP outer backward primer	Yu_orf1ab_B3	TGACAAGCTACAACACGT	15370 - 15387	ORF1ab	94.44	90	100	94.81
CoV2ID279 Raw data Min-max	LAMP forward inner primer	Yu_orf1ab_FIP	AGGTGAGGGTTTTCTACATCACTATATTGG(...)	15205 - 15227	ORF1ab	47.83	50	99.06	65.63
CoV2ID280 Raw data Min-max	LAMP backward inner primer	Yu_orf1ab_BIP	ATGGGTTGGGATTATCCTAAATGTGTGCGA(...)	15344 - 15361	ORF1ab	50	50	99.06	66.35
CoV2ID281 Raw data Min-max	LAMP loop forward primer	Yu_orf1ab_LF	CAGTTTTTAACATGTTGTGCCAACC	15229 - 15253	ORF1ab	44	50	99.05	64.35
CoV2ID282 Raw data Min-max	LAMP loop backward primer	Yu_orf1ab_LB	ATAGAGCCATGCCTAACATGCTT	15308 - 15330	ORF1ab	45.65	50	98.83	64.83
CoV2ID283 Raw data Min-max	PCR primer forward	M-475-F	TGTGACATCAAGGACCTGCC	26997 - 27016	M	92.5	80	99.99	90.83
CoV2ID284 Raw data Min-max	PCR primer reverse	M-574-R	CTGAGTCACCTGCTACACGC	27077 - 27096	M	95	100	100	98.33
CoV2ID285 Raw data Min-max	Probe	M-507-P	TGTTGCTACATCACGAACGC	27029 - 27048	M	95	90	99.84	94.95
CoV2ID286 Raw data Min-max	PCR primer forward	S-1850-F	GCACAGAAGTCCCTGTTGCT	23412 - 23431	S	90	90	99.97	93.33
CoV2ID287 Raw data Min-max	PCR primer reverse	S-1949-R	AAACAGCCTGCACGTGTTTG	23492 - 23511	S	70	100	99.48	89.83
CoV2ID288 Raw data Min-max	Probe	S-1884-P	ACTTACTCCTACTTGGCGTGT	23446 - 23466	S	97.62	100	100	99.21
CoV2ID289 Raw data Min-max	LAMP outer forward primer	S1-F3	AGTTTGAGCCATCAACTCA	3084 - 3102	ORF1ab	42.1	40	98.03	60.04
CoV2ID290 Raw data Min-max	LAMP outer backward primer	S1-B3	TGAACCTCAACAATTGTTTGA	3271 - 3291	ORF1ab	97.62	100	100	99.21
CoV2ID291 Raw data Min-max	LAMP forward inner primer	S1-F1P	CAGGTTGAAGAGCAGCAGAAGTGTACTGAA(...)	3114 - 3135	ORF1ab	36.95	20	98.52	51.82
CoV2ID292 Raw data Min-max	LAMP backward inner primer	S1-B1P	AGCAAGAAGAAGATTGGTTAGATGATGTCT(...)	3244 - 3262	ORF1ab	50	50	99.06	66.35
CoV2ID293 Raw data Min-max	LAMP loop forward primer	S1-LPF	GGCACCAAATTCCAAAGGT	3139 - 3157	ORF1ab	44.73	50	98.02	64.25
CoV2ID294 Raw data Min-max	LAMP loop backward primer	S1-LPB	AACTGTTGGTCAACAAGACGG	3223 - 3243	ORF1ab	50	50	99.06	66.35
CoV2ID295 Raw data Min-max	LAMP outer forward primer	S2-F3	ATTCTAAGCACACGCCTAT	22173 - 22191	S	50	50	98.13	66.04
CoV2ID296 Raw data Min-max	LAMP outer backward primer	S2-B3	GAAGATAACCCACATAATAAGCT	22351 - 22373	S	50	50	96.34	65.45
CoV2ID297 Raw data Min-max	LAMP forward inner primer	S2-F1P	ACCTATTGGCAAATCTACCAATGGTTTAGT(...)	22195 - 22213	S	46.3	40	98.13	61.48
CoV2ID298 Raw data Min-max	LAMP backward inner primer	S2-B1P	ATCACTAGGTTTCAAACTTTACTTGCCTGT(...)	22322 - 22140	S	30.77	50	98.12	59.63
CoV2ID299 Raw data Min-max	LAMP loop forward primer	S2-LPF	TTCTAAAGCCGAAAAACCCTG	22214 - 22234	S	42.85	50	98.08	63.65
CoV2ID300 Raw data Min-max	LAMP loop backward primer	S2-LPB	CATAGAAGTTATTTGACTCCTGGTG	22295 - 22319	S	48	50	98.09	65.36
CoV2ID301 Raw data Min-max	LAMP outer forward primer	S3-F3	CACCTTATGGGTTGGGATT	15277 - 15295	ORF1ab	47.37	50	99.04	65.47
CoV2ID302 Raw data Min-max	LAMP outer backward primer	S3-B3	AACATATAGTGAACCGCCA	15447 - 15465	ORF1ab	97.37	90	100	95.79
CoV2ID303 Raw data Min-max	LAMP forward inner primer	S3-F1P	GTTTGCGAGCAAGAACAAGTGAATGTGATA(...)	15302 - 15320	ORF1ab	93.18	100	99.98	97.72
CoV2ID304 Raw data Min-max	LAMP backward inner primer	S3-B1P	ATACAACGTGTTGTAGCTTGTCACACATGA(...)	15427 - 15448	ORF1ab	94.23	90	100	94.74
CoV2ID305 Raw data Min-max	LAMP loop forward primer	S3-LPF	GGCCATAATTCTAAGCATGTTA	15321 - 15342	ORF1ab	47.73	60	98.86	68.86
CoV2ID306 Raw data Min-max	LAMP loop backward primer	S3-LPB	ATTAGCTAATGAGTGTGCTCAAGTA	15402 - 15426	ORF1ab	96	100	100	98.67
CoV2ID307 Raw data Min-max	LAMP outer forward primer	S4-F3	ACATGCTTAGAATTATGGCC	15323 - 15342	ORF1ab	47.5	60	98.84	68.78
CoV2ID308 Raw data Min-max	LAMP outer backward primer	S4-B3	GCTTGACAAATGTTAAAAACACT	15514 - 15536	ORF1ab	97.83	100	100	99.27
CoV2ID309 Raw data Min-max	LAMP forward inner primer	S4-F1P	TTGAGCACACTCATTAGCTAATCTATCACT(...)	15343 - 15361	ORF1ab	94.23	100	100	98.08
CoV2ID310 Raw data Min-max	LAMP backward inner primer	S4-B1P	GAGTGAAATGGTCATGTGTGGCGCATAAGC(...)	15492 - 15509	ORF1ab	95.65	100	100	98.55
CoV2ID311 Raw data Min-max	LAMP loop forward primer	S4-LPF	GACAAGCTACAACACGTTGTATGT	15363 - 15386	ORF1ab	93.75	100	100	97.92
CoV2ID312 Raw data Min-max	LAMP loop backward primer	S4-LPB	ACTATATGTTAAACCAGGTGGAACC	15456 - 15480	ORF1ab	96	100	100	98.67
CoV2ID313 Raw data Min-max	LAMP outer forward primer	S5-F3	ATGGCCTCACTTGTTCTT	15337 - 15354	ORF1ab	80.56	90	99.72	90.09
CoV2ID314 Raw data Min-max	LAMP outer backward primer	S5-B3	TAACATTGGCCGTGACAG	15536 - 15553	ORF1ab	97.22	100	100	99.07
CoV2ID315 Raw data Min-max	LAMP forward inner primer	S5-F1P	TTGAGCACACTCATTAGCTAATCTATGCTC(...)	15354 - 15372	ORF1ab	94.23	100	100	98.08
CoV2ID316 Raw data Min-max	LAMP backward inner primer	S5-B1P	GTCATGTGTGGCGGTTCACTACACTATTAG(...)	15497 - 15518	ORF1ab	97.72	100	100	99.24
CoV2ID317 Raw data Min-max	LAMP loop forward primer	S5-LPF	ACGGTGTGACAAGCTACAACA	15373 - 15393	ORF1ab	97.62	100	100	99.21
CoV2ID318 Raw data Min-max	LAMP loop backward primer	S5-LPB	CCAGGTGGAACCTCATCAGGAG	15469- 15490	ORF1ab	95.45	100	100	98.48
CoV2ID319 Raw data Min-max	PCR primer forward	Smyrlaki_N1_F	GACCCCAAAATCAGCGAA	28287 - 28304	N	84.21	90	99.99	91.4
CoV2ID320 Raw data Min-max	PCR primer forward	Smyrlaki_E_F	GGAAGAGACAGGTACGTTAATA	26262 - 26283	E	93.18	100	100	97.73
CoV2ID321 Raw data Min-max	PCR primer reverse	Smyrlaki_E_R	AGCAGTACGCACACAATCGAA	26354 - 26374	E	92.86	80	99.95	90.94
CoV2ID322 Raw data Min-max	PCR primer forward	Smyrlaki_RdRP_F	GTCATGTGTGGCGGTTCACT	15439 - 15458	ORF1ab	97.5	100	100	99.17
CoV2ID323 Raw data Min-max	PCR primer reverse	Smyrlaki_RdRP_R	CAACACTATTAGCATAAGCAGTTGT	15519 - 15496	ORF1ab	97.91	100	100	99.3
CoV2ID324 Raw data Min-max	PCR primer forward	Li_S_F	TGTACTTGGACAATCAAAAAGAGTTGAT	24658 - 24685	S	98.22	100	100	99.4
CoV2ID325 Raw data Min-max	PCR primer reverse	Li_S_R	AGGAGCAGTTGTGAAGTTCTTTTC	24776 - 24799	S	39.59	50	99.05	62.88
CoV2ID326 Raw data Min-max	gRNA	N-gene gRNA #1	UAAUUUCUACUAAGUGUAGAUCCCCCAGCG(...)	29196 - 29215	N	95	100	100	98.33
CoV2ID327 Raw data Min-max	gRNA	E-gene gRNA #2	UAAUUUCUACUAAGUGUAGAUGUGGUAUUC(...)	26314 - 26333	E	95	100	99.9	98.3
CoV2ID328 Raw data Min-max	gRNA	N-gene gRNA #2	UAAUUUCUACUAAGUGUAGAUGCAAUGUUG(...)	28756 - 28775	N	97.5	100	100	99.17
CoV2ID329 Raw data Min-max	gRNA	E-gene gRNA #1	UAAUUUCUACUAAGUGUAGAUUUGCUUUCG(...)	26306 - 26325	E	97.5	100	100	99.17
CoV2ID330 Raw data Min-max	PCR primer forward	SARS-CoV-2-15283-F	ATGGGTTGGGATTATCCTAAATG	15283 - 15305	ORF1ab	50	50	99.06	66.35
CoV2ID331 Raw data Min-max	PCR primer reverse	SARS-CoV-2-15887-R	TGTTGAGAGCAAAATTCATG	15868 - 15887	ORF1ab	47.5	40	99.05	62.18
CoV2ID332 Raw data Min-max	PCR primer forward	SARS-CoV-2-15286-F	GGTTGGGATTATCCTAAATGTGA	15286 - 15308	ORF1ab	50	50	99.06	66.35
CoV2ID333 Raw data Min-max	PCR primer reverse	SARS-CoV-2-15725-R	GCATCGTCAGAGAGTATCATCAT	15703 - 15725	ORF1ab	95.65	100	100	98.55
CoV2ID334 Raw data Min-max	PCR primer forward	Wuhan-TM2020For	TCGTGCTACAACTTCCTCAAG	28743 - 28763	N	97.62	100	100	99.21
CoV2ID335 Raw data Min-max	PCR Probe	Wuhan-TM2020Probe	CCGCCTCTGCTCCCTTCTGC	28790 - 28809	N	87.5	90	99.94	92.48
CoV2ID336 Raw data Min-max	PCR primer reverse	SARS2-28875R-G	CTGCCTGGAGTTGAATTTCTTG	28854 - 28875	N	77.28	70	99.59	82.29
CoV2ID337 Raw data Min-max	PCR primer reverse	SARS2-28875R-A	CTGCCTGGAGTTGAATTTCTTA	28854 -28875	N	80.95	90	99.81	90.25
CoV2ID338 Raw data Min-max	LAMP outer forward primer	ORF7a-F3	TCTTGGCACTGATAACACTC	27410 - 27429	ORF7a	90	100	100	96.67
CoV2ID339 Raw data Min-max	LAMP outer backward primer	ORF7a-B3	GATCTGGCACGTAACTGAT	27617 - 27635	ORF7a	94.73	100	99.98	98.24
CoV2ID340 Raw data Min-max	LAMP forward inner primer	ORF7a-FIP	TCCAGAAGAGCAAGGTTCTTTTAAAGCTAC(...)	27430 - 27451	ORF7a	90	70	99.99	86.66
CoV2ID341 Raw data Min-max	LAMP backward inner primer	ORF7a-BIP	AGCTGATAACAAATTTGCACTGACGTTTTA(...)	27593 - 27610	ORF7a	91.66	100	100	97.22
CoV2ID342 Raw data Min-max	LAMP loop forward primer	ORF7a-LF	GTTGTACCTCTAACACACTCTTGGT	27452 - 27476	ORF7a	98	90	100	96
CoV2ID343 Raw data Min-max	LAMP loop backward primer	ORF7a-LB	GCTTTAGCACTCAATTTGCTTTTGC	27566 - 27590	ORF7a	95.84	100	100	98.61
CoV2ID344 Raw data Min-max	LAMP LAMP outer forward primer	M-GENE-F3	AGTAATAGGTTTCCTATTCCTTAC	26588 - 26611	M	97.91	100	100	99.3
CoV2ID345 Raw data Min-max	LAMP LAMP outer backward prime(...)	M-GENE-B3	AGCCACATCAAGCCTACA	26783 - 26800	M	100	100	100	100
CoV2ID346 Raw data Min-max	LAMP forward inner primer	M-GENE-FIP	GCCATAACAGCCAGACCAAAATTAATGGAT(...)	26613 - 26635	M	95.84	100	99.99	98.61
CoV2ID347 Raw data Min-max	LAMP backward inner primer	M-GENE-BIP	TTAGCTTGTTTTGTGCTTGCTGACAAGCCA(...)	267763 - 26780	M	97.72	100	100	99.24
CoV2ID348 Raw data Min-max	LAMP loop forward primer	M-GENE-LF	CAAAAACCTATTCCTGTTGGCATAG	26636 - 26660	M	88.46	90	99.99	92.82
CoV2ID349 Raw data Min-max	LAMP loop backward primer	M-GENE-LB	CAGAATAAATTGGATCACCGGTGGA	26735 - 26759	M	92	90	99.99	94
CoV2ID350 Raw data Min-max	LAMP loop backward primer	M-GENE-LB-2	GAATAAATTGGATCACCGGTGGA	26737 - 26759	M	93.48	100	100	97.83
CoV2ID351 Raw data Min-max	LAMP LAMP outer forward primer	ORF3a-A-F3	CACTTCAGACTATTACCAGCT	26013 - 26033	ORF3a	95.24	90	100	95.08
CoV2ID352 Raw data Min-max	LAMP LAMP outer backward prime(...)	ORF3a-A-B3	GCTTGTGCTTACAAAGGC	26211 - 26228	ORF3a	94.44	90	99.98	94.81
CoV2ID353 Raw data Min-max	LAMP forward inner primer	ORF3a-A-FIP	GTTCTTCAGGCTCATCAACAATTTTCTCAA(...)	26037 - 26059	ORF3a	96	100	100	98.67
CoV2ID354 Raw data Min-max	LAMP backward inner primer	ORF3a-A-BIP	CCAAATTCACACAATCGACGGTTTAGTAGT(...)	26189 - 26206	ORF3a	93.47	90	99.47	94.32
CoV2ID355 Raw data Min-max	LAMP loop forward primer	ORF3a-A-LF	TGAAGAAGGTAACATGTTCAACACC	26062 - 26086	ORF3a	96	100	100	98.67
CoV2ID356 Raw data Min-max	LAMP loop backward primer	ORF3a-A-LB	CGGAGTTGTTAATCCAGTAATGGAA	26151 - 26175	ORF3a	78	80	99.84	85.95
CoV2ID357 Raw data Min-max	LAMP LAMP outer forward primer	ORF3a-B-F3	ATTTTGTTCGCGCTACTG	25472 - 25489	ORF3a	94.44	100	100	98.15
CoV2ID358 Raw data Min-max	LAMP LAMP outer backward prime(...)	ORF3a-B-B3	ACGAGCAAAAGGTGTGAG	25665 - 25682	ORF3a	100	100	100	100
CoV2ID359 Raw data Min-max	LAMP forward inner primer	ORF3a-B-FIP	CTCTGAAAAACAGCAAGAAGAGCAAGATAC(...)	25494- 25513	ORF3a	94	90	99.97	94.66
CoV2ID360 Raw data Min-max	LAMP backward inner primer	ORF3a-B-BIP	TAACCCTCAAAAAGAGATGGCAACAAACAA(...)	25635 - 25654	ORF3a	89.58	90	99.94	93.17
CoV2ID361 Raw data Min-max	LAMP loop forward primer	ORF3a-B-LF	ACAATAAGCCATCCGAAAGGGA	25514 - 25535	ORF3a	90.91	80	99.94	90.28
CoV2ID362 Raw data Min-max	LAMP loop backward primer	ORF3a-B-LB	CACTCTCCAAGGGTGTTCACT	25607 - 25627	ORF3a	88.09	90	99.99	92.7
CoV2ID363 Raw data Min-max	LAMP forward inner primer	GENE-N-T7-FIP	TCTGGCCCAGTTCCTAGGTAGTTAATACGA(...)	28545 - 28563	N	95.45	100	100	98.48
CoV2ID364 Raw data Min-max	LAMP forward inner primer	ORF7-T7-FIP	TCCAGAAGAGCAAGGTTCTTTTAAATAATA(...)	27430 - 27451	ORF7	90	70	99.99	86.66
CoV2ID365 Raw data Min-max	LAMP forward inner primer	ORF3a-A-T7-FIP	GTTCTTCAGGCTCATCAACAATTTTTAATA(...)	26037 - 26059	ORF3a	96	100	100	98.67
CoV2ID366 Raw data Min-max	gRNA	Schermer_Orf1ab	GATTTAGACTACCCCAAAAACGAAGGGGAC(...)	6510 - 6537	ORF1ab	98.22	100	100	99.41
CoV2ID367 Raw data Min-max	gRNA	Schermer_S Gene	GATTTAGACTACCCCAAAAACGAAGGGGAC(...)	22323 - 22350	S	42.85	40	96.46	59.77
CoV2ID368 Raw data Min-max	gRNA	Schermer_Gene-N	GATTTAGACTACCCCAAAAACGAAGGGGAC(...)	28626 - 28653	N	91.07	100	99.98	97.02
CoV2ID369 Raw data Min-max	gRNA	Schermer_Orf7	GATTTAGACTACCCCAAAAACGAAGGGGAC(...)	27509 - 27535	ORF7	92.85	90	99.99	94.28
CoV2ID370 Raw data Min-max	gRNA	Schermer_Orf3	GATTTAGACTACCCCAAAAACGAAGGGGAC(...)	26107 - 26134	ORF3	94.65	100	100	98.21
CoV2ID371 Raw data Min-max	RPA forward primer	Orf1ab-Fw_v1	GAAATTAATACGACTCACTATAGGGCGAAG(...)	6472 - 6501	ORF1ab	96.67	80	99.97	92.21
CoV2ID372 Raw data Min-max	RPA reverse primer	Orf1ab-Rev_v1	TAGTAAGACTAGAATTGTCTACATAAGCAG(...)	6554 - 6584	ORF1ab	96.78	90	100	95.59
CoV2ID373 Raw data Min-max	RPA forward primer	S-RPA-Fw_v1	GAAATAATACGACTCACTATAGGGAGGTTT(...)	22271 - 22300	S	33.34	50	98.12	60.49
CoV2ID374 Raw data Min-max	RPA reverse primer	S-RPA-Rev_v1	TCCTAGGTTGAAGATAACCCACATAATAAG	22353 - 22382	S	48.27	50	96.34	64.87
CoV2ID375 Raw data Min-max	PCR primer forward	Li_orf1ab_F	TGATGATACTCTCTGACGATGCTGT	15704 - 15728	ORF1ab	96	100	100	98.67
CoV2ID376 Raw data Min-max	PCR primer reverse	Li_orf1ab_R	CTCAGTCCAACATTTTGCTTCAGA	15823 - 15846	ORF1ab	50	50	99.06	66.35
CoV2ID377 Raw data Min-max	PCR Probe	Li_orf1ab_P	ATGCATCTCAAGGTCTAGTG	15749 - 15768	ORF1ab	95	100	99.98	98.33
CoV2ID378 Raw data Min-max	PCR primer forward	BTstin_ORF1ab_F	GGATCAAGAATCCTTTGGTGG	13213 - 13233	ORF1ab	90.48	100	99.91	96.8
CoV2ID379 Raw data Min-max	PCR primer reverse	BTstin_ORF1ab_R	GTCACAAAATCCTTTAGGATTTGGA	13273 - 13297	ORF1ab	98	90	100	96
CoV2ID380 Raw data Min-max	PCR Probe	BTstin_ORF1ab_P	CATCGTGTTGTCTGTACTGCCGTTGCC	13236 - 13262	ORF1ab	100	100	100	100
CoV2ID381 Raw data Min-max	PCR primer forward	WHCV-F1	CCAGGTAACAAACCAACCAACTT	20 -42	-	2.17	10	89.26	33.81
CoV2ID382 Raw data Min-max	PCR primer reverse	WHCV-R1	GGCAACCAACATAAGAGAACACAC	1491 - 1514	ORF1ab	47.91	50	99.06	65.66
CoV2ID383 Raw data Min-max	PCR primer forward	WHCV-F2	CAACCAAATGTGCCTTTCAACTC	1201 - 1223	ORF1ab	93.75	100	100	97.92
CoV2ID384 Raw data Min-max	PCR primer reverse	WHCV-R2	CACAGTGTCATCACCAAAAGTAACCT	2730 - 2755	ORF1ab	98.08	100	100	99.36
CoV2ID385 Raw data Min-max	PCR primer forward	WHCV-F3	TGTCACGCACTCAAAGGGATT	2392 - 2412	ORF1ab	90.47	90	99.95	93.47
CoV2ID386 Raw data Min-max	PCR primer reverse	WHCV-R3	GACAGCTAAGTAGACATTTGTGCGAA	3771 - 3796	ORF1ab	88.46	100	99.96	96.14
CoV2ID387 Raw data Min-max	PCR primer forward	WHCV-F4	ATGCCATGCAAGTTGAATCTGAT	3507 - 3529	ORF1ab	97.83	100	99.96	99.26
CoV2ID388 Raw data Min-max	PCR primer reverse	WHCV-R4	TGCGTGTGGAGGTTAATGTTGT	4989 - 5010	ORF1ab	93.18	90	100	94.39
CoV2ID389 Raw data Min-max	PCR primer forward	WHCV-F5	GATCTCTCAAAGTGCCAGCTACAGT	4665 - 4689	ORF1ab	96	100	100	98.67
CoV2ID390 Raw data Min-max	PCR primer reverse	WHCV-R5	TTATAATCAATAGCCACCACATCACC	6158 - 6183	ORF1ab	48.08	50	99.06	65.71
CoV2ID391 Raw data Min-max	PCR primer forward	WHCV-F6	AGAAACTTTGTATTGCATAGACGGTG	5791 - 5816	ORF1ab	100	100	100	100
CoV2ID392 Raw data Min-max	PCR primer reverse	WHCV-R6	ACCAGTACAGTAAGAAGGCATGCC	7037 - 7060	ORF1ab	97.91	100	100	99.3
CoV2ID393 Raw data Min-max	PCR primer forward	WHCV-F7	GTTTAGCTGCTGTTAATAGTGTCCCTT	6642 - 6668	ORF1ab	48.15	50	99.06	65.73
CoV2ID394 Raw data Min-max	PCR primer reverse	WHCV-R7	TGCAACTTCCGCACTATCACC	8006 - 8026	ORF1ab	95.24	100	100	98.41
CoV2ID395 Raw data Min-max	PCR primer forward	WHCV-F8	TCCTACTGACCAGTCTTCTTACATCGT	7711 - 7737	ORF1ab	46.3	50	99.05	65.11
CoV2ID396 Raw data Min-max	PCR primer reverse	WHCV-R8	TTTCACAAGTGCCGTGCCTAC	9216 - 9236	ORF1ab	45.24	50	99.04	64.76
CoV2ID397 Raw data Min-max	PCR primer forward	WHCV-F9	GGTTTGCCTGGCACGATATTAC	8867 - 8888	ORF1ab	86.37	80	99.99	88.79
CoV2ID398 Raw data Min-max	PCR primer reverse	WHCV-R9	ACTTAGGTGTCTTAGGATTGGCTGTAT	10329 - 10355	ORF1ab	96.3	100	100	98.76
CoV2ID399 Raw data Min-max	PCR primer forward	WHCV-F10	TTGTCATCTCGCAAAGGCTCT	9958 - 9978	ORF1ab	95.24	100	100	98.41
CoV2ID400 Raw data Min-max	PCR primer reverse	WHCV-R10	GAGATTATAAGAGCCCACATGGAAA	11457 - 11481	ORF1ab	48	50	98.13	65.38
CoV2ID401 Raw data Min-max	PCR primer forward	WHCV-F11	GCTATGGGTATTATTGCTATGTCTGCT	11108 - 11134	ORF1ab	48.15	50	99.04	65.73
CoV2ID402 Raw data Min-max	PCR primer reverse	WHCV-R11	TGGATTTCCCACAATGCTGAT	12541 - 12561	ORF1ab	95.24	90	99.99	95.08
CoV2ID403 Raw data Min-max	PCR primer forward	WHCV-F12	CTGATCAAGCTATGACCCAAATGT	12279 - 12302	ORF1ab	100	100	100	100
CoV2ID404 Raw data Min-max	PCR primer reverse	WHCV-R12	GCAACAGCTGGACAATCCTTAAGT	13707 - 13730	ORF1ab	95.84	100	99.97	98.6
CoV2ID405 Raw data Min-max	PCR primer forward	WHCV-F13	TCTGCGGTATGTGGAAAGGTTAT	13380 - 13402	ORF1ab	91.3	90	99.85	93.72
CoV2ID406 Raw data Min-max	PCR primer reverse	WHCV-R13	GTCAGCAGCATACACAAGTAATTCCT	14546 - 14571	ORF1ab	46.16	40	99.06	61.74
CoV2ID407 Raw data Min-max	PCR primer forward	WHCV-F14	AGGGCTTTAACTGCAGAGTCACAT	14185 - 14208	ORF1ab	95.84	100	100	98.61
CoV2ID408 Raw data Min-max	PCR primer reverse	WHCV-R14	GCGGACATACTTATCGGCAATT	15582 - 15603	ORF1ab	93.18	90	99.91	94.37
CoV2ID409 Raw data Min-max	PCR primer forward	WHCV-F15	TCAATAGCCGCCACTAGAGGAG	15172 - 15193	ORF1ab	50	50	99.02	66.34
CoV2ID410 Raw data Min-max	PCR primer reverse	WHCV-R15	TCACCAGCATTTGTCCAGTCAC	16571 - 16592	ORF1ab	100	100	100	100
CoV2ID411 Raw data Min-max	PCR primer forward	WHCV-F16	TTGGGGCTTGTGTTCTTTGC	16241 - 16260	ORF1ab	92.5	90	99.99	94.16
CoV2ID412 Raw data Min-max	PCR primer reverse	WHCV-R16	CAAGCAGGGTTACGTGTAAGGAAT	17730 - 17753	ORF1ab	89.58	90	99.44	93.01
CoV2ID413 Raw data Min-max	PCR primer forward	WHCV-F17	TGTCAATGCCAGATTACGTGCT	17394 - 17415	ORF1ab	95.45	100	99.9	98.45
CoV2ID414 Raw data Min-max	PCR primer reverse	WHCV-R17	TAACAAAGCACTCGTGGACAGC	18880 - 18901	ORF1ab	43.18	50	99.05	64.08
CoV2ID415 Raw data Min-max	PCR primer forward	WHCV-F18	TATGGGCACATGGCTTTGAGT	18593 - 18613	ORF1ab	47.62	50	99	65.54
CoV2ID416 Raw data Min-max	PCR primer reverse	WHCV-R18	TAAGAACACCATTACGGGCATTT	20025 - 20047	ORF1ab	45.65	50	99.05	64.9
CoV2ID417 Raw data Min-max	PCR primer forward	WHCV-F19	TTGATGGACAACAGGGTGAAGTAC	19664 - 19687	ORF1ab	45.84	40	99.05	61.63
CoV2ID418 Raw data Min-max	PCR primer reverse	WHCV-R19	CGAAGTGTCCCATGAGCTTATAAA	21197 - 21220	ORF1ab	97.91	100	100	99.3
CoV2ID419 Raw data Min-max	PCR primer forward	WHCV-F20	AGGAGTTGCACCAGGTACAGCT	20886 - 20907	ORF1ab	97.72	100	100	99.24
CoV2ID420 Raw data Min-max	PCR primer reverse	WHCV-R20	ACCCACATAATAAGCTGCAGCAC	22344 - 22366	S	38.46	30	96.33	54.93
CoV2ID421 Raw data Min-max	PCR primer forward	WHCV-F21	CTATTAATTTAGTGCGTGATCTCCCTC	22188 - 22214	S	40.74	30	98.12	56.29
CoV2ID422 Raw data Min-max	PCR primer reverse	WHCV-R21	AAATTTGTGGGTATGGCAATAGAGTTA	23689 - 23715	S	48.15	50	99.05	65.73
CoV2ID423 Raw data Min-max	PCR primer forward	WHCV-F22	ACTTACTCCTACTTGGCGTGTTTATTC	23446 - 23472	S	98.15	100	100	99.38
CoV2ID424 Raw data Min-max	PCR primer reverse	WHCV-R22	GCATTAATGCCAGAGATGTCACC	25061 - 25083	S	45.65	40	98.04	61.23
CoV2ID425 Raw data Min-max	PCR primer forward	WHCV-F23	CTATCATCTTATGTCCTTCCCTCAGTC	24700 - 24726	S	100	100	100	100
CoV2ID426 Raw data Min-max	PCR primer reverse	WHCV-R23	TAGTCGTCGTCGGTTCATCATAAAT	26179 - 26203	ORF3a	58	40	99.39	65.8
CoV2ID427 Raw data Min-max	PCR primer forward	WHCV-F24	TACTTCAGGTGATGGCACAACAA	25899 - 25921	ORF3a	89.13	90	99.98	93.04
CoV2ID428 Raw data Min-max	PCR primer reverse	WHCV-R24	AAGCTCACAAGTAGCGAGTGTTATCA	27419 - 27444	ORF7a	94.23	80	100	91.41
CoV2ID429 Raw data Min-max	PCR primer forward	WHCV-F25	CGTGTAGCAGGTGACTCAGGTTT	27078 - 27100	M	95.65	100	100	98.55
CoV2ID430 Raw data Min-max	PCR primer reverse	WHCV-R25	TACCGTCACCACCACGAATTC	28551 - 28571	N	100	100	100	100
CoV2ID431 Raw data Min-max	PCR primer forward	WHCV-F26	GGACCCCAAAATCAGCGAAAT	28286 - 28306	N	84.09	90	99.98	91.36
CoV2ID432 Raw data Min-max	PCR primer reverse	WHCV-R26	AAAATCACATGGGGATAGCACTACT	29824 - 29848	-	0	0	93.93	31.31
CoV2ID433 Raw data Min-max	PCR primer forward	S1423F	GCCGGTAGCACACCTTGTAA	22985 - 23004	S	45	50	98.12	64.37
CoV2ID434 Raw data Min-max	PCR primer reverse	S1736R2	GGATCACGGACAGCATCAGT	23279 - 23298	S	92.5	90	100	94.17
CoV2ID435 Raw data Min-max	PCR primer forward	S2620F	ACTTCTGCACTGTTAGCGGG	24182 - 24201	S	50	50	99.06	66.35
CoV2ID436 Raw data Min-max	PCR primer reverse	S3174R2	ATGAGGTGCTGACTGAGGGA	24717 - 24736	S	100	100	100	100
CoV2ID437 Raw data Min-max	PCR primer reverse	S3240R1	GGCAGGAGCAGTTGTGAAGT	24783 - 24802	S	40	50	99.05	63.02
CoV2ID438 Raw data Min-max	RACE primer	5-GSP	CCACATGAGGGACAAGGACACCAAGTG	573 - 599	ORF1ab	85.19	100	99.78	94.99
CoV2ID439 Raw data Min-max	RACE primer	5-GSPn	CATGACCATGAGGTGCAGTTCGAGC	491 - 515	ORF1ab	44	30	98.34	57.45
CoV2ID440 Raw data Min-max	RACE primer	3-GSP	TGTCGCGCATTGGCATGGAAGTCACACC	29223 - 29250	N	85.72	100	99.96	95.22
CoV2ID441 Raw data Min-max	RACE primer	3-GSPn	CTCAAGCCTTACCGCAGAGACAGAAG	29409 - 29434	N	38.46	50	98.12	62.19
CoV2ID442 Raw data Min-max	Target Generation primer	nsp10-Std-T7-F	TAATACGACTCACTATAGGGGTGGGGGACA(...)	13122 - 13141	ORF1ab	100	100	100	100
CoV2ID443 Raw data Min-max	Target Generation primer	nsp10-Std-R	AGACGAGGTCTGCCATTGTG	13806 - 13825	ORF1ab	100	100	100	100
CoV2ID444 Raw data Min-max	Target Generation primer	RdRp-Std-T7-F	TAATACGACTCACTATAGGGAATAGAGCTC(...)	15093 - 15113	ORF1ab	50	50	99.06	66.35
CoV2ID445 Raw data Min-max	Target Generation primer	RdRp-Std-R	CATCTACAAAACAGCCGGCC	15957 - 15976	ORF1ab	42.85	50	99.05	63.97
CoV2ID446 Raw data Min-max	Target Generation primer	nsp14-Std-T7-F	TAATACGACTCACTATAGGGTAGTGCTAAA(...)	18447 - 18466	ORF1ab	50	50	99.06	66.35
CoV2ID447 Raw data Min-max	Target Generation primer	nsp14-Std-R	AACTGCCACCATCACAACCA	19275 - 19294	ORF1ab	50	50	99.06	66.35
CoV2ID448 Raw data Min-max	Target Generation primer	E-Std-T7-F	TAATACGACTCACTATAGGGGCGTGCCTTT(...)	26207 - 26226	E	95	90	99.98	95
CoV2ID449 Raw data Min-max	Target Generation primer	E-Std-R	GGCAGGTCCTTGATGTCACA	26997 - 27016	E	92.5	80	99.99	90.83
CoV2ID450 Raw data Min-max	Target Generation primer	N-Std-T7-F	TAATACGACTCACTATAGGGGAATTGTGCG(...)	28068 - 28087	N	92.23	90	99.78	94
CoV2ID451 Raw data Min-max	Target Generation primer	N-Std-R	TGTCTCTGCGGTAAGGCTTG	29411 - 29430	N	35	50	98.11	61.04
CoV2ID452 Raw data Min-max	LAMP outer forward primer	Rohaim_ORF1ab_F3	CCGCCACTAGAGGAGCTACT	15179 - 15198	ORF1ab	50	50	99.01	66.34
CoV2ID453 Raw data Min-max	LAMP outer backward primer	Rohaim_ORF1ab_B3	TGTTGTAGCTTGTCACAC	15373 - 15390	ORF1ab	97.22	100	100	99.07
CoV2ID454 Raw data Min-max	LAMP forward inner primer	Rohaim_ORF1ab_FIP	ATTGGAACAAGCAAATTCTATTATAGTGAT(...)	15255 - 15280	ORF1ab	44.45	40	99.05	61.16
CoV2ID455 Raw data Min-max	LAMP backward inner primer	Rohaim_ORF1ab_BIP	TATGGGTTGGGATTATCCTAAATGTGCCTC(...)	15340 - 15358	ORF1ab	50	50	99.06	66.35
CoV2ID456 Raw data Min-max	LAMP loop forward primer	Rohaim_ORF1ab_LF	GGTTGGCACAACATGTTAAAAAC	15229 - 15251	ORF1ab	43.48	50	99.05	64.18
CoV2ID457 Raw data Min-max	LAMP loop backward primer	Rohaim_ORF1ab_LB	AGCCATGCCTAACATGCTTAG	15312 - 15332	ORF1ab	45.24	50	98.81	64.68
CoV2ID458 Raw data Min-max	PCR primer forward	Rohaim_RdRP_F	GTGAAATGGTCATGTGTGGCGG	15431 - 15452	ORF1ab	95.45	90	100	95.15
CoV2ID459 Raw data Min-max	PCR primer reverse	Rohaim_RdRP_R	TATGCTAATAGTGTTTTTAACATTTG	15505 - 15530	ORF1ab	100	100	100	100
CoV2ID460 Raw data Min-max	RPA forward primer	S-RPA-Forward_v1	GAAATTAATACGACTCACTATAGGGAGGTT(...)	22271 - 22300	S	33.34	50	98.12	60.49
CoV2ID461 Raw data Min-max	RPA forward primer	Orf1ab-RPA-Forward_v1	GAAATTAATACGACTCACTATAGGGCGAAG(...)	6472 - 6501	ORF1ab	96.67	80	99.97	92.21
CoV2ID462 Raw data Min-max	sgRNA	nCoV-RdRp-sgRNA R	ATGTGTGGCGGTTCACTATATGTatctaca(...)	15442 - 15464	RdRp	97.83	100	100	99.27
CoV2ID463 Raw data Min-max	sgRNA	nCoV-ORF1b-sgRNA R	TGGTTGCTTTGTAGGTTACCTGTatctaca(...)	18787 - 18809	ORF1b	43.75	50	99.04	64.26
CoV2ID464 Raw data Min-max	sgRNA	nCOV-ORF1ab-sgRNA R	GTCTGTACCGTCTGCGGTATGTGatctaca(...)	13370 - 13392	ORF1ab	95.65	90	99.96	95.2
CoV2ID465 Raw data Min-max	PCR primer forward	SARS-CoV-2_IBS_RdRP1_F	CATGTGTGGCGGTTCACTAT	15441 - 15460	RdRp	97.5	100	100	99.17
CoV2ID466 Raw data Min-max	PCR primer reverse	SARS-CoV-2_IBS_RdRP1_R	TGCATTAACATTGGCCGTGA	15539 - 15558	RdRp	97.5	90	100	95.83
CoV2ID467 Raw data Min-max	PCR primer forward	SARS-CoV-2_IBS_S1_F	CTACATGCACCAGCAACTGT	23114 - 23133	S	35	50	98.12	61.04
CoV2ID468 Raw data Min-max	PCR primer reverse	SARS-CoV-2_IBS_S1_R	CACCTGTGCCTGTTAAACCA	23194 - 23213	S	47.5	50	99.06	65.52
CoV2ID469 Raw data Min-max	PCR primer forward	SARS-CoV-2_IBS_E1_F	TTCGGAAGAGACAGGTACGTT	26259 - 26279	E	90.47	100	100	96.82
CoV2ID470 Raw data Min-max	PCR primer reverse	SARS-CoV-2_IBS_E1_R	CACACAATCGATGCGCAGTA	26349 - 26365	E	90	100	99.95	96.65
CoV2ID471 Raw data Min-max	PCR primer forward	SARS-CoV-2_IBS_N1_F	CAATGCTGCAATCGTGCTAC	28732 - 28751	N	92.5	100	99.99	97.5
CoV2ID472 Raw data Min-max	PCR primer reverse	SARS-CoV-2_IBS_N1_R	GTTGCGACTACGTGATGAGG	28830 - 28849	N	75	90	99.94	88.31
CoV2ID473 Raw data Min-max	PCR primer forward	SARS-CoV-2_IBS_RdRP2_F	AGAATAGAGCTCGCACCGTA	15092 - 15111	RdRp	50	50	99.06	66.35
CoV2ID474 Raw data Min-max	PCR primer reverse	SARS-CoV-2_IBS_RdRP2_R	CTCCTCTAGTGGCGGCTATT	15174 -15193	RdRp	50	50	99.01	66.34
CoV2ID475 Raw data Min-max	PCR primer forward	SARS-CoV-2_IBS_RdRP3_F	TCTGTGATGCCATGCGAAAT	14015 - 14034	RdRp	97.5	90	100	95.83
CoV2ID476 Raw data Min-max	PCR primer reverse	SARS-CoV-2_IBS_RdRP3_R	ACTACCTGGCGTGGTTTGTA	14108 - 14127	RdRp	92.5	100	100	97.5
CoV2ID477 Raw data Min-max	PCR primer forward	SARS-CoV-2_IBS_S2_F	GCTGGTGCTGCAGCTTATTA	22340 - 22359	S	39.28	40	96.32	58.53
CoV2ID478 Raw data Min-max	PCR primer reverse	SARS-CoV-2_IBS_S2_R	AGGGTCAAGTGCACAGTCTA	22428 - 22447	S	42.5	40	96.28	59.59
CoV2ID479 Raw data Min-max	PCR primer forward	SARS-CoV-2_IBS_E2_F	TTCGGAAGAGACAGGTACGTTA	26259 - 26280	E	90.91	100	100	96.97
CoV2ID480 Raw data Min-max	PCR primer reverse	SARS-CoV-2_IBS_E2_R	AGCAGTACGCACACAATCG	26356 - 26374	E	97.37	100	100	99.12
CoV2ID481 Raw data Min-max	PCR primer forward	SARS-CoV-2_IBS_N2_F	GCTGCAATCGTGCTACAACT	28736 - 28755	N	92.5	100	99.99	97.5
CoV2ID482 Raw data Min-max	PCR primer reverse	SARS-CoV-2_IBS_N2_R	TGAACTGTTGCGACTACGTG	28836 - 28855	N	72.5	90	99.7	87.4
CoV2ID483 Raw data Min-max	PCR primer forward	Yip_RdRp_OTter_F	AGGTATTGGGAACCTGAGTTTTATGAGGCT(...)	16180 - 16219	RdRp	66.25	100	99.41	88.55
CoV2ID484 Raw data Min-max	PCR primer reverse	Yip_RdRp_OTter_R	ACCTGGAGCATTGCAAACATACGGATTAAC(...)	16360 - 16398	RdRp	90.62	90	99.97	93.53
CoV2ID485 Raw data Min-max	PCR primer forward	Yip_RdRp_Inner_F	CGCATACAGTCTTRCAGGCT	16220 - 16239	RdRp	100	100	100	100
CoV2ID486 Raw data Min-max	PCR primer reverse	Yip_RdRp_Inner_R	GTGTGATGTTGAWATGACATGGTC	16330 - 16352	RdRp	100	100	100	100
CoV2ID487 Raw data Min-max	PCR Probe	Yip_RdRp_probe	TTAAGATGTGGTGCTTGCATACGTAGAC	16276 - 16303	RdRp	96.43	100	99.99	98.81
CoV2ID488 Raw data Min-max	PCR primer forward	Yip_RdRp_OTter_F	AATTGCACAATTTGCCCCCAGCGCTTCA	29182 - 29209	N	94.65	100	100	98.21
CoV2ID489 Raw data Min-max	PCR primer reverse	Yip_RdRp_OTter_R	TGCGTCAATATGCTTATTCAGCAAAATGAC(...)	29310 - 29350	N	96.34	100	100	98.78
CoV2ID490 Raw data Min-max	PCR primer forward	Yip_RdRp_Inner_F	GCGTTCTTCGGAATGTCG	29210 - 29227	N	97.22	90	100	95.74
CoV2ID491 Raw data Min-max	PCR primer reverse	Yip_RdRp_Inner_R	TTGGATCTTTGTCATCCAATTTG	29284 - 29306	N	86.95	100	99.86	95.61
CoV2ID492 Raw data Min-max	PCR Probe	Yip_RdRp_probe	AACGTGGTTGACCTACACAGST	29257 - 29278	N	87.5	80	99.99	89.16